RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 INPPL1O15357 1258 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 TEX28O15482 410 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 SLC26A4O43511 780 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 TOM1L1O75674 476 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 B3GAT3O94766 335 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 GCNT3O95395 438 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 CASP1P29466 404 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 ZP2Q05996 745 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 SOX4Q06945 474 aaPredicted RBP13.11□□□□□ -0.31
TPM1-216ENST00000558910 SMAD2Q15796 467 aaKnown RBP13.11□□□□□ -0.31
TPM1-216ENST00000558910 USP41Q3LFD5 358 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
TPM1-216ENST00000558910 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 SNX27Q96L92 541 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
TPM1-216ENST00000558910 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
TPM1-216ENST00000558910 STK17AQ9UEE5 414 aa13.11□□□□□ -0.31
TPM1-216ENST00000558910 H0YCG3 227 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 PODXLO00592 558 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 ABLIM1O14639 778 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 CUTAO60888 179 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 PROZP22891 400 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 AFMP43652 599 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 ARPP19P56211 112 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 KCNA1Q09470 495 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 COASYQ13057 564 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 SHC4Q6S5L8 630 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 ADHFE1Q8IWW8 467 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 FBXL18Q96ME1 805 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
TPM1-216ENST00000558910 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 PANK4Q9NVE7 773 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
TPM1-216ENST00000558910 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
TPM1-216ENST00000558910 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
TPM1-216ENST00000558910 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
TPM1-216ENST00000558910 PPP6R2O75170 966 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 RFPL2O75678 378 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
TPM1-216ENST00000558910 YEATS4O95619 227 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 ACOT2P49753 483 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 CLCN4P51793 760 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 CDR1P51861 262 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 ZNF131P52739 623 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 ASIC1P78348 528 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 DSG1Q02413 1049 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 MCL1Q07820 350 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 NAB2Q15742 525 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 SLC10A6Q3KNW5 377 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 KIAA0319Q5VV43 1072 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 C3orf58Q8NDZ4 430 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 SLC22A17Q8WUG5 538 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 TTPALQ9BTX7 342 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 RPF1Q9H9Y2 349 aaKnown RBP13.09□□□□□ -0.31
TPM1-216ENST00000558910 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 MUTYHQ9UIF7 546 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 KCNG1Q9UIX4 513 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
TPM1-216ENST00000558910 GOLGA8IPA6NC78 632 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 GOLGA8JA6NMD2 632 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ADAM12O43184 909 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.32
TPM1-216ENST00000558910 LILRB3O75022 631 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 GLUD1P00367 558 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ADH1AP07327 375 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
TPM1-216ENST00000558910 CASP5P51878 434 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 KCNC3Q14003 757 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
TPM1-216ENST00000558910 PSMD5Q16401 504 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ZPBP2Q6X784 338 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 GLIS3Q8NEA6 775 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
TPM1-216ENST00000558910 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 SAAL1Q96ER3 474 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 FIZ1Q96SL8 496 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 POMKQ9H5K3 350 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
TPM1-216ENST00000558910 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms