RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 PDZD7Q9H5P4 517 aa16.72■□□□□ 0.27
RPL28-206ENST00000558752 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
RPL28-206ENST00000558752 MRPS17Q9Y2R5 130 aaKnown RBP16.72■□□□□ 0.27
RPL28-206ENST00000558752 H0YCG3 227 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 TMEM189-UBE2V1I3L0A0 370 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 PTGESO14684 152 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 SPTLC1O15269 473 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 HIP1RO75146 1068 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 LIG1P18858 919 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 SDHBP21912 280 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 OR1D2P34982 312 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 NPTX2P47972 431 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 SLC12A3P55017 1021 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 PEX3P56589 373 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 UBXN2BQ14CS0 331 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 PTPAQ15257 358 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 ANKS3Q6ZW76 656 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 FOXQ1Q9C009 403 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 CCDC113Q9H0I3 377 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 GDE1Q9NZC3 331 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 MRPS23Q9Y3D9 190 aaKnown RBP16.71■□□□□ 0.27
RPL28-206ENST00000558752 ZNF292O60281 2723 aa16.71■□□□□ 0.27
RPL28-206ENST00000558752 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 B3GAT3O94766 335 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 FGFR3P22607 806 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 ELF1P32519 619 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 DDIT3P35638 169 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 YARSP54577 528 aaKnown RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 SLC39A14Q15043 492 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 DAW1Q8N136 415 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 DDX27Q96GQ7 796 aaKnown RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 RUSC1Q9BVN2 902 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 TOPORSQ9NS56 1045 aaPredicted RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 LARSQ9P2J5 1176 aaKnown RBP16.7■□□□□ 0.26
RPL28-206ENST00000558752 MTRRQ9UBK8 725 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 ODF2LQ9ULJ1 636 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 BACE2Q9Y5Z0 518 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 CLIC4Q9Y696 253 aa16.7■□□□□ 0.26
RPL28-206ENST00000558752 DMXL1Q9Y485 3027 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 FAM170BA6NMN3 283 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 KRT37O76014 449 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 LRG1P02750 347 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 PLS3P13797 630 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 PTPN2P17706 415 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 ABCD1P33897 745 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 TXLNAP40222 546 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 NTHL1P78549 312 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 RASSF8Q8NHQ8 419 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 KCNN1Q92952 543 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 RPP25Q9BUL9 199 aaKnown RBP16.69■□□□□ 0.26
RPL28-206ENST00000558752 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
RPL28-206ENST00000558752 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 SLC38A7Q9NVC3 462 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 CACNG4Q9UBN1 327 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 CDY1Q9Y6F8 540 aa16.69■□□□□ 0.26
RPL28-206ENST00000558752 ECI2O75521 394 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 MAPK7Q13164 816 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 NAB2Q15742 525 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 ATL3Q6DD88 541 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 ZNF461Q8TAF7 563 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 ITFG1Q8TB96 612 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 PLIN2Q99541 437 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 KXD1Q9BQD3 176 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 CCDC94Q9BW85 323 aaPredicted RBP16.68■□□□□ 0.26
RPL28-206ENST00000558752 POLD4Q9HCU8 107 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 LTB4R2Q9NPC1 389 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 AVENQ9NQS1 362 aaPredicted RBP16.68■□□□□ 0.26
RPL28-206ENST00000558752 NCDNQ9UBB6 729 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
RPL28-206ENST00000558752 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 MIA3Q5JRA6 1907 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 MYH15Q9Y2K3 1946 aa16.68■□□□□ 0.26
RPL28-206ENST00000558752 H7C4K7 107 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 ZNF197O14709 1029 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 GLULP15104 373 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
RPL28-206ENST00000558752 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
RPL28-206ENST00000558752 CLCNKBP51801 687 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 STRN3Q13033 797 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 PPP2R5DQ14738 602 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 UPP1Q16831 310 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 ARSHQ5FYA8 562 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 NPAS3Q8IXF0 933 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 ELMOD1Q8N336 334 aa16.67■□□□□ 0.26
RPL28-206ENST00000558752 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
RPL28-206ENST00000558752 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms