RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 EPAS1Q99814 870 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 ADAM33Q9BZ11 813 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 LSG1Q9H089 658 aaKnown RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 SMOC1Q9H4F8 434 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 NPDC1Q9NQX5 325 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-207ENST00000558500 C2orf42Q9NWW7 574 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 KLK14Q9P0G3 267 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 MTRRQ9UBK8 725 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 PCDHGA10Q9Y5H3 936 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 CDY1Q9Y6F8 540 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 MAST4O15021 2626 aa7.5□□□□□ -1.21
LRRC28-207ENST00000558500 MYH15Q9Y2K3 1946 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 CYP3A7-CYP3A51PA0A087WV96 503 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 KLF18A0A0U1RQI7 1052 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ARHGEF37A1IGU5 675 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 WDR27A2RRH5 827 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 TAF4O00268 1085 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ARNTLO00327 626 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 EML1O00423 815 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ZNF197O14709 1029 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 GIPC1O14908 333 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 B4GALT5O43286 388 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 DKC1O60832 514 aaKnown RBP eCLIP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 NPTXRO95502 500 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 TDP2O95551 362 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 LRG1P02750 347 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ARF4P18085 180 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 FGFR3P22607 806 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 CYP3A7P24462 503 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 VIPR2P41587 438 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 CCR2P41597 374 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 QARSP47897 775 aaKnown RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 RCAN1P53805 252 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 LSM11P83369 360 aaKnown RBP eCLIP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 MBTD1Q05BQ5 628 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 POU5F1BQ06416 359 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ZNF252P-AS1Q0IIN9 211 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 EMC2Q15006 297 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 NAB2Q15742 525 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 DGKKQ5KSL6 1271 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 C1orf228Q6PIY5 440 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 KBTBD6Q86V97 674 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 CDR2LQ86X02 465 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 MFSD6LQ8IWD5 586 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ETNPPLQ8TBG4 499 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 TBCKQ8TEA7 893 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 GAB3Q8WWW8 586 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 TCEANC2Q96MN5 208 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 ZSWIM3Q96MP5 696 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 CORO1BQ9BR76 489 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 TRPV4Q9HBA0 871 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 VPS45Q9NRW7 570 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 WRAP73Q9P2S5 460 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 PCDHGA5Q9Y5G8 931 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 BACE2Q9Y5Z0 518 aa7.49□□□□□ -1.21
LRRC28-207ENST00000558500 HELZ2Q9BYK8 2649 aaKnown RBP7.49□□□□□ -1.21
LRRC28-207ENST00000558500 AKAP13Q12802 2813 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC163A0A0D9SF12 145 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 A0A1B0GUA9 196 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 SLC38A8A6NNN8 435 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 C4orf47A7E2U8 309 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 PTGESO14684 152 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 PRPF3O43395 683 aaKnown RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 RPP40O75818 363 aaKnown RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 TOP3BO95985 862 aaKnown RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 THP07101 528 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 MPLP40238 635 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 SOX9P48436 509 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 ROR1Q01973 937 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 TFDP1Q14186 410 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 MXD4Q14582 209 aaPredicted RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 NECTIN1Q15223 517 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 CYP4A22Q5TCH4 519 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 TCEAL6Q6IPX3 200 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 TXNDC11Q6PKC3 985 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 PDZD4Q76G19 769 aaPredicted RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 SYNPOQ8N3V7 929 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC148Q8NFR7 591 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 CSGALNACT1Q8TDX6 532 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 TCEAL3Q969E4 200 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 MTRQ99707 1265 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 EDEM2Q9BV94 578 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 XPNPEP1Q9NQW7 623 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 ASH1LQ9NR48 2969 aaKnown RBP7.48□□□□□ -1.21
LRRC28-207ENST00000558500 NCANO14594 1321 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 IGSF10Q6WRI0 2623 aa7.48□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 MYBPHLA2RUH7 354 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 HEPACAM2A8MVW5 462 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 SPECC1L-ADORA2AF8WAN1 911 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 TMEM189-UBE2V1I3L0A0 370 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CHADO15335 359 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 EXTL3O43909 919 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 MOSPD3O75425 235 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms