RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 PAX3P23760 479 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 PIK3CAP42336 1068 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 ZBED6P86452 979 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 TRPC3Q13507 836 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 LMBRD2Q68DH5 695 aaPredicted RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 SPC24Q8NBT2 197 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 ZMAT2Q96NC0 199 aaKnown RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 APOL6Q9BWW8 343 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 GANQ9H2C0 597 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 FAM124BQ9H5Z6 455 aaPredicted RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 SIX2Q9NPC8 291 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 FAM207AQ9NSI2 230 aaPredicted RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
VPS18-202ENST00000558474 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
VPS18-202ENST00000558474 ARL5CA6NH57 179 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 ASS1P00966 412 aaKnown RBP16.03■□□□□ 0.16
VPS18-202ENST00000558474 THP07101 528 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 ACTN1P12814 892 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 UCHL3P15374 230 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 LRPAP1P30533 357 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 KLK7P49862 253 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 RBP5P82980 135 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 GCNT1Q02742 428 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 GRIK3Q13003 919 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS18-202ENST00000558474 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 CACNA2D4Q7Z3S7 1137 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 DEFB128Q7Z7B8 93 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 LRRC52Q8N7C0 313 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 CXorf38Q8TB03 319 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 SYN2Q92777 582 aaPredicted RBP16.03■□□□□ 0.16
VPS18-202ENST00000558474 SEMA4DQ92854 862 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 PANX2Q96RD6 677 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 NAA15Q9BXJ9 866 aaKnown RBP16.03■□□□□ 0.16
VPS18-202ENST00000558474 IL23AQ9NPF7 189 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 PCDHB7Q9Y5E2 793 aa16.03■□□□□ 0.16
VPS18-202ENST00000558474 TDRD15B5MCY1 1934 aaKnown RBP16.03■□□□□ 0.16
VPS18-202ENST00000558474 TTC3P53804 2025 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 PTGESO14684 152 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 MFAP3LO75121 409 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 OFD1O75665 1012 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 PTMAP06454 111 aaKnown RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 TBXAS1P24557 533 aaPredicted RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 CASP14P31944 242 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 RPL9P32969 192 aaKnown RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 MLH1P40692 756 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 PNPLA4P41247 253 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 HS1BP3Q53T59 392 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.16
VPS18-202ENST00000558474 CCDC186Q7Z3E2 898 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 GSTCDQ8NEC7 633 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 OR8K1Q8NGG5 319 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 URGCPQ8TCY9 931 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 VWCEQ96DN2 955 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 UROC1Q96N76 676 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 GAD1Q99259 594 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 STK33Q9BYT3 514 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
VPS18-202ENST00000558474 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 ANO9A1A5B4 782 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 NRDCO43847 1150 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
VPS18-202ENST00000558474 ITGB3P05106 788 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 P4HA1P13674 534 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 CSF2RAP15509 400 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 ITGB8P26012 769 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 HNRNPH3P31942 346 aaKnown RBP16.01■□□□□ 0.15
VPS18-202ENST00000558474 KRT9P35527 623 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
VPS18-202ENST00000558474 FXR1P51114 621 aaKnown RBP eCLIP16.01■□□□□ 0.15
VPS18-202ENST00000558474 MFAP3P55082 362 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
VPS18-202ENST00000558474 MYO1EQ12965 1108 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 PHLDB3Q6NSJ2 640 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 TC2NQ8N9U0 490 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 BAP1Q92560 729 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 LPPQ93052 612 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 DDX27Q96GQ7 796 aaKnown RBP16.01■□□□□ 0.15
VPS18-202ENST00000558474 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 ZNF560Q96MR9 790 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 DNAJC7Q99615 494 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 SIX4Q9UIU6 781 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 LRFN2Q9ULH4 789 aa16.01■□□□□ 0.15
VPS18-202ENST00000558474 MEIS3P2A8K0S8 358 aa16■□□□□ 0.15
VPS18-202ENST00000558474 PIRO00625 290 aa16■□□□□ 0.15
VPS18-202ENST00000558474 EPHB6O15197 1021 aa16■□□□□ 0.15
VPS18-202ENST00000558474 EVI5O60447 810 aa16■□□□□ 0.15
VPS18-202ENST00000558474 CCDC172P0C7W6 258 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms