RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 DERAQ9Y315 318 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 PCDHGC5Q9Y5F6 944 aa9.23□□□□□ -0.93
TPM1-213ENST00000558400 TRANK1O15050 2925 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 LACTBL1A8MY62 500 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ANKRD63C9JTQ0 380 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 LINC01565O15544 149 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 KIF20AO95235 890 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 IL18RAPO95256 599 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 CNPP09543 421 aaKnown RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 PFKFB1P16118 471 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ANP32AP39687 249 aaKnown RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 CLCNKBP51801 687 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 DLX2Q07687 328 aaPredicted RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 SMAD2Q15796 467 aaKnown RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 ZBTB6Q15916 424 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 GLRA4Q5JXX5 417 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 FAM26FQ5R3K3 315 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ANKRD54Q6NXT1 300 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 SLC39A4Q6P5W5 647 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 CYP26C1Q6V0L0 522 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 RTL10Q7L3V2 364 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 TAS1R1Q7RTX1 841 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 SMRP1Q8NCR6 262 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ZNF507Q8TCN5 953 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 RIN2Q8WYP3 895 aaPredicted RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 PIK3R5Q8WYR1 880 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 PAGE5Q96GU1 130 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 FBXL18Q96ME1 805 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ZMAT2Q96NC0 199 aaKnown RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
TPM1-213ENST00000558400 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 HAPLN2Q9GZV7 340 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 PLEKHA4Q9H4M7 779 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 C2CD2Q9Y426 696 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 NUB1Q9Y5A7 615 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 HCFC2Q9Y5Z7 792 aa9.22□□□□□ -0.93
TPM1-213ENST00000558400 ARHGEF37A1IGU5 675 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 PODXLO00592 558 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 C2CD2LO14523 706 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 SYN3O14994 580 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 MBTPS2O43462 519 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ACTN4O43707 911 aaKnown RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 FAM189A1O60320 539 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 TBX10O75333 385 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 PRPF6O94906 941 aaKnown RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 ZNF202O95125 648 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 KIF4AO95239 1232 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 GLP2RO95838 553 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 CXCL8P10145 99 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 MYBP10242 640 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ADSSP30520 456 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 LRPAP1P30533 357 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ACOT2P49753 483 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 FOXK2Q01167 660 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 EHHADHQ08426 723 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 SURF1Q15526 300 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ENOX2Q16206 610 aaKnown RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 SEZ6Q53EL9 994 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ATAT1Q5SQI0 421 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 SPATA1Q5VX52 437 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ANKS3Q6ZW76 656 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 HS2ST1Q7LGA3 356 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 CEP57Q86XR8 500 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 FSIP1Q8NA03 581 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 APPL2Q8NEU8 664 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 GOLGA5Q8TBA6 731 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 SLC22A17Q8WUG5 538 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 CACTINQ8WUQ7 758 aaKnown RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 AUTS2Q8WXX7 1259 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 RABGGTAQ92696 567 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 RIPOR3Q96MK2 946 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 NECTIN4Q96NY8 510 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 PAAF1Q9BRP4 392 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 S1PR5Q9H228 398 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 CXCL16Q9H2A7 254 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ADAM7Q9H2U9 754 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 CD320Q9NPF0 282 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 HOOK1Q9UJC3 728 aaKnown RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 BARX2Q9UMQ3 279 aaPredicted RBP9.21□□□□□ -0.94
TPM1-213ENST00000558400 UBE4BO95155 1302 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 MYH11P35749 1972 aa9.21□□□□□ -0.94
TPM1-213ENST00000558400 ZNF233A6NK53 670 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 H7C4K7 107 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 TEX28O15482 410 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 EXTL3O43909 919 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 GLUD1P00367 558 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 FGFR3P22607 806 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 TNFSF9P41273 254 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 MTHFRP42898 656 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 CLCN4P51793 760 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 CASP5P51878 434 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 NDUFA8P51970 172 aa9.2□□□□□ -0.94
TPM1-213ENST00000558400 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
TPM1-213ENST00000558400 KCNA1Q09470 495 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms