RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 PCDHA12Q9UN75 941 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 PCDHA5Q9Y5H7 936 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 TRIP11Q15643 1979 aa12.28□□□□□ -0.44
RABGGTA-204ENST00000558376 TADA2AO75478 443 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 GLRA2P23416 452 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 IGSF22Q8N9C0 903 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 PAGE5Q96GU1 130 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 CLSTN3Q9BQT9 956 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 CXCL16Q9H2A7 254 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 LRWD1Q9UFC0 647 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 PARP2Q9UGN5 583 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 FBXW11Q9UKB1 542 aa12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 MTF2Q9Y483 593 aaPredicted RBP12.27□□□□□ -0.44
RABGGTA-204ENST00000558376 ADAM12O43184 909 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 SLFN14P0C7P3 912 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 NCBP1Q09161 790 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 GRIK3Q13003 919 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 TFDP1Q14186 410 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 ECM1Q16610 540 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 RASSF8Q8NHQ8 419 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 ITFG1Q8TB96 612 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 HASPINQ8TF76 798 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 RUBCNQ92622 972 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 BLZF1Q9H2G9 400 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 CDH7Q9ULB5 785 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 PATJQ8NI35 1801 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 EPG5Q9HCE0 2579 aa12.27□□□□□ -0.45
RABGGTA-204ENST00000558376 F5P12259 2224 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 A0A1B0GUA9 196 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 LYPLA2O95372 231 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 ORC2Q13416 577 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 POSTNQ15063 836 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 IQUBQ8NA54 791 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 LNX1Q8TBB1 728 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 HSD17B14Q9BPX1 270 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 DDX23Q9BUQ8 820 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 ZFP37Q9Y6Q3 630 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-204ENST00000558376 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CCL16O15467 120 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 PLCG1P19174 1290 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 BMP6P22004 513 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 IGFBP6P24592 240 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 PDIA5Q14554 519 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 PUM1Q14671 1186 aaKnown RBP eCLIP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 FAM171A1Q5VUB5 890 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 RRAGBQ5VZM2 374 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 SLC27A1Q6PCB7 646 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 ZC3H14Q6PJT7 736 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 LUZP1Q86V48 1076 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 HACE1Q8IYU2 909 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 PIK3R5Q8WYR1 880 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 FGF13Q92913 245 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 TTPALQ9BTX7 342 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 NFKBIZQ9BYH8 718 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CCSER1Q9C0I3 900 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 ANKEF1Q9NU02 776 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.458e-6■■■■■ 107
RABGGTA-204ENST00000558376 KANSL1LA0AUZ9 987 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 DGAT1O75907 488 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 KIF4AO95239 1232 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 STAT6P42226 847 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CREMQ03060 361 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 TUSC3Q13454 348 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CEP57Q86XR8 500 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 SLFN12Q8IYM2 578 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 CEP57L1Q8IYX8 460 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 SHDQ96IW2 340 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 AK8Q96MA6 479 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 PNMA5Q96PV4 448 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 POLR3FQ9H1D9 316 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 GPRC5CQ9NQ84 441 aa12.25□□□□□ -0.45
RABGGTA-204ENST00000558376 ACACBO00763 2458 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 PTGESO14684 152 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 C8AP07357 584 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 CD72P21854 359 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 TXLNAP40222 546 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 RARRES1P49788 294 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 CUL4BQ13620 913 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 NAB2Q15742 525 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 MLF2Q15773 248 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 PSMD5Q16401 504 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 PPM1LQ5SGD2 360 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 POTEHQ6S545 545 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 PIGOQ8TEQ8 1089 aa12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-204ENST00000558376 KXD1Q9BQD3 176 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms