RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 KDM6BO15054 1643 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 POTECB2RU33 542 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 P4HA2O15460 535 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TOMM70O94826 608 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CPA2P48052 419 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CDK17Q00537 523 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CSTF3Q12996 717 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 IMPG1Q17R60 797 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZFP1Q6P2D0 407 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TTC27Q6P3X3 843 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 MARK2Q7KZI7 788 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 HPS3Q969F9 1004 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 EFCAB1Q9HAE3 211 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 MYRFQ9Y2G1 1151 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CPSF1Q10570 1443 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 C1orf232A0A0U1RR37 186 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 AREL1O15033 823 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CASP1P29466 404 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 ARPC4P59998 168 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TRIM25Q14258 630 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 KRT72Q14CN4 511 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 ARID3BQ8IVW6 561 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TAGAPQ8N103 731 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 CENPTQ96BT3 561 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 APOL4Q9BPW4 351 aa12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-201ENST00000558282 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 PCCAP05165 728 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP6V1C1P21283 382 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 FASTKD1Q53R41 847 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 HEATR6Q6AI08 1181 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 BNC2Q6ZN30 1099 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 TRPC4APQ8TEL6 797 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 EZH1Q92800 747 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZNF556Q9HAH1 456 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 UGP2Q16851 508 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ANGPTL8Q6UXH0 198 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 RINLQ6ZS11 566 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 EIF1ADQ8N9N8 165 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SLC35G2Q8TBE7 412 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SNX19Q92543 992 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 EXT2Q93063 718 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 UFL1O94874 794 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 DPYDQ12882 1025 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 MAPK7Q13164 816 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ITGA9Q13797 1035 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ARMC4Q5T2S8 1044 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 OTUB1Q96FW1 271 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 CCDC17Q96LX7 622 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZNF577Q9BSK1 485 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 FUCA2Q9BTY2 467 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SYNJ2BP-COX16A0A087WUM0 186 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 TRPC5OSA6NMA1 111 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 PDZK1P1A8MUH7 402 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 PDE8BO95263 885 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 GALCP54803 685 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 BCAR1P56945 870 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 RPS6P62753 249 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 WASHC5Q12768 1159 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 KLHL12Q53G59 568 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 GLG1Q92896 1179 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 COX16Q9P0S2 106 aa12.34□□□□□ -0.43
CSPG4P12-201ENST00000558282 PDE9AO76083 593 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 RPL5P46777 297 aaKnown RBP12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 KCNQ4P56696 695 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 POU5F1BQ06416 359 aa12.33□□□□□ -0.43
CSPG4P12-201ENST00000558282 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms