RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 RAD54LQ92698 747 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 STAMQ92783 540 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
USP3-207ENST00000558218 PLIN2Q99541 437 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 ST6GALNAC4Q9H4F1 302 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 PARVGQ9HBI0 331 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 BLOC1S4Q9NUP1 217 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 STK17AQ9UEE5 414 aa11.06□□□□□ -0.64
USP3-207ENST00000558218 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CCDC195A0A1B0GUA6 201 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CASTOR2A6NHX0 329 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 F8W810 466 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 TGM5O43548 720 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 TRAK2O60296 914 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 KIF4AO95239 1232 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 PIGRP01833 764 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CLTAP09496 248 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 PAX3P23760 479 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 TXLNAP40222 546 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 POU5F1Q01860 360 aaKnown RBP11.05□□□□□ -0.64
USP3-207ENST00000558218 KCNC4Q03721 635 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 RESTQ13127 1097 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 RAB33AQ14088 237 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 SLC39A14Q15043 492 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 GPBP1Q86WP2 473 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CD302Q8IX05 232 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 MYCT1Q8N699 235 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 KRI1Q8N9T8 703 aaKnown RBP11.05□□□□□ -0.64
USP3-207ENST00000558218 TDRD5Q8NAT2 981 aaKnown RBP11.05□□□□□ -0.64
USP3-207ENST00000558218 RASSF8Q8NHQ8 419 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 LARP4BQ92615 738 aaKnown RBP11.05□□□□□ -0.64
USP3-207ENST00000558218 REEP2Q9BRK0 252 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 PAAF1Q9BRP4 392 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
USP3-207ENST00000558218 MAN1C1Q9NR34 630 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CNTN3Q9P232 1028 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 SORCS3Q9UPU3 1222 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 BACE2Q9Y5Z0 518 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 CLIC4Q9Y696 253 aa11.05□□□□□ -0.64
USP3-207ENST00000558218 FAM86C2PA6NEL3 165 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 TMEM221A6NGB7 291 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 C2CD4DB7Z1M9 353 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 M0R296 226 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 SYN3O14994 580 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 STX6O43752 255 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 ZMYND10O75800 440 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 FAM13AO94988 1023 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 KRT18P05783 430 aaKnown RBP11.04□□□□□ -0.64
USP3-207ENST00000558218 ADRB2P07550 413 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 POU2F2P09086 479 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP3-207ENST00000558218 PLCG1P19174 1290 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 CYP3A5P20815 502 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 HOXA9P31269 272 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 CLCNKBP51801 687 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 GTF2BQ00403 316 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 RAD51AP2Q09MP3 1159 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP3-207ENST00000558218 KARSQ15046 597 aaKnown RBP11.04□□□□□ -0.64
USP3-207ENST00000558218 PSMD5Q16401 504 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 SLC10A6Q3KNW5 377 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 RTP2Q5QGT7 225 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 SLFN12LQ6IEE8 588 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 ANKS3Q6ZW76 656 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 PALB2Q86YC2 1186 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 KREMEN2Q8NCW0 462 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 NXPE3Q969Y0 559 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 SNX27Q96L92 541 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 PRRX2Q99811 253 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 CLSTN3Q9BQT9 956 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP3-207ENST00000558218 IGSF9Q9P2J2 1179 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 FBXO2Q9UK22 296 aaPredicted RBP11.04□□□□□ -0.64
USP3-207ENST00000558218 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 TBX20Q9UMR3 447 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 ZFP37Q9Y6Q3 630 aaPredicted RBP11.04□□□□□ -0.64
USP3-207ENST00000558218 TECTAO75443 2155 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 CITO14578 2027 aa11.04□□□□□ -0.64
USP3-207ENST00000558218 XPOTO43592 962 aaKnown RBP11.03□□□□□ -0.64
USP3-207ENST00000558218 TBCAO75347 108 aaKnown RBP11.03□□□□□ -0.64
USP3-207ENST00000558218 PLA2G5P39877 138 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 LIG4P49917 911 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 OSTNP61366 133 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 GRIN1Q05586 938 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 MCM6Q14566 821 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 ZBTB6Q15916 424 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 GLRA4Q5JXX5 417 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 RRAGBQ5VZM2 374 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 KANK3Q6NY19 840 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 CD300LGQ6UXG3 332 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 CCDC73Q6ZRK6 1079 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 HFE2Q6ZVN8 426 aa11.03□□□□□ -0.64
USP3-207ENST00000558218 SV2BQ7L1I2 683 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms