RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KLHL10Q6JEL2 608 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 DCLRE1AQ6PJP8 1040 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 ADGRD2Q7Z7M1 963 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 CCDC127Q96BQ5 260 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 DDX27Q96GQ7 796 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 GTPBP4Q9BZE4 634 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 NSUN3Q9H649 340 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 TRAF3IP3Q9Y228 551 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 DERAQ9Y315 318 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 NLRC5Q86WI3 1866 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 SF3B1O75533 1304 aaKnown RBP eCLIP15.53■□□□□ 0.081e-6■■■■■ 175.4
USP3-205ENST00000557884 TRIM49BA6NDI0 452 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 HIDE1A8MVS5 230 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 C2CD2LO14523 706 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 PPEF2O14830 753 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 CXCL14O95715 111 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 MBD3O95983 291 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 SOD2P04179 222 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 DLATP10515 647 aaKnown RBP15.53■□□□□ 0.08
USP3-205ENST00000557884 CYP3A5P20815 502 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 NR2F2P24468 414 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 BRCC3P46736 316 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 SMC1AQ14683 1233 aaKnown RBP15.53■□□□□ 0.08
USP3-205ENST00000557884 SKIV2LQ15477 1246 aaKnown RBP15.53■□□□□ 0.08
USP3-205ENST00000557884 ZCWPW2Q504Y3 356 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 COBLL1Q53SF7 1204 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 CD300LGQ6UXG3 332 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 SLC9A9Q8IVB4 645 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 EEF2KMTQ96G04 330 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 TSPAN18Q96SJ8 248 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 TSG101Q99816 390 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 HERC2P3Q9BVR0 1158 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 NGRNQ9NPE2 291 aaKnown RBP15.53■□□□□ 0.08
USP3-205ENST00000557884 CTNND2Q9UQB3 1225 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 MYO9BQ13459 2157 aa15.53■□□□□ 0.08
USP3-205ENST00000557884 PTPRJQ12913 1337 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.52■□□□□ 0.08
USP3-205ENST00000557884 PPP1R3GB7ZBB8 358 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 PSMA7O14818 248 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 PER2O15055 1255 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 URODP06132 367 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 CTSAP10619 480 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 LRPAP1P30533 357 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 GTF2F1P35269 517 aaKnown RBP eCLIP15.52■□□□□ 0.08
USP3-205ENST00000557884 PMS1P54277 932 aaKnown RBP15.52■□□□□ 0.08
USP3-205ENST00000557884 FAM171A1Q5VUB5 890 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 ANKRD40Q6AI12 368 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 CENPPQ6IPU0 288 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.08
USP3-205ENST00000557884 OR5B17Q8NGF7 314 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 FNBP1Q96RU3 617 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
USP3-205ENST00000557884 MTMR12Q9C0I1 747 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 IGFLR1Q9H665 355 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 TLE6Q9H808 572 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 DPP3Q9NY33 737 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 NUB1Q9Y5A7 615 aa15.52■□□□□ 0.08
USP3-205ENST00000557884 XIRP2A4UGR9 3374 aa15.52■□□□□ 0.07
USP3-205ENST00000557884 TMEM189-UBE2V1I3L0A0 370 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 EFEMP2O95967 443 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 TMEM191BP0C7N4 346 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 CCNE1P24864 410 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 RPL13P26373 211 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 NRIP1P48552 1158 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 GLUD2P49448 558 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 STX17P56962 302 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 HYAL1Q12794 435 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 ADAM9Q13443 819 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 MYBPC2Q14324 1141 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 PSMD6Q15008 389 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 SURF1Q15526 300 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 PTPN14Q15678 1187 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 NFIL3Q16649 462 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 USP41Q3LFD5 358 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 C9orf57Q5W0N0 161 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 PDE12Q6L8Q7 609 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 KIAA1841Q6NSI8 718 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 CEP57Q86XR8 500 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 RNF168Q8IYW5 571 aaPredicted RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 MRPL43Q8N983 215 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 TRIML1Q8N9V2 468 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 PLEKHO2Q8TD55 490 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 CACTINQ8WUQ7 758 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 NELFBQ8WX92 580 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 DHTKD1Q96HY7 919 aaPredicted RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 CGRRF1Q99675 332 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 INTS13Q9NVM9 706 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 FRMD4BQ9Y2L6 1034 aa15.51■□□□□ 0.07
USP3-205ENST00000557884 PRRC2BQ5JSZ5 2229 aaKnown RBP15.51■□□□□ 0.07
USP3-205ENST00000557884 C2orf71A6NGG8 1288 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 AKAP3O75969 853 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 ITGB3P05106 788 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 TNNI1P19237 187 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
USP3-205ENST00000557884 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms