RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MCM4P33991 863 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 MCL1Q07820 350 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 PABPC1LQ4VXU2 614 aaKnown RBP15.98■□□□□ 0.15
SHMT2-235ENST00000557740 SEZ6Q53EL9 994 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 VARS2Q5ST30 1063 aaKnown RBP15.98■□□□□ 0.15
SHMT2-235ENST00000557740 RSPO2Q6UXX9 243 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-235ENST00000557740 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 ST13P5Q8NFI4 369 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-235ENST00000557740 GPR152Q8TDT2 470 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 FGF13Q92913 245 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 REEP2Q9BRK0 252 aa15.98■□□□□ 0.15
SHMT2-235ENST00000557740 MTCL1Q9Y4B5 1905 aaKnown RBP15.98■□□□□ 0.15
SHMT2-235ENST00000557740 ZFHX2Q9C0A1 2572 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-235ENST00000557740 KRBA1A5PL33 1030 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 K7ENM7 598 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 PRRG1O14668 218 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 HNRNPDLO14979 420 aaKnown RBP15.97■□□□□ 0.15
SHMT2-235ENST00000557740 PI15O43692 258 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 FAM13AO94988 1023 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 LRG1P02750 347 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 KRT18P05783 430 aaKnown RBP15.97■□□□□ 0.15
SHMT2-235ENST00000557740 CLTAP09496 248 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 CXCL8P10145 99 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ELF1P32519 619 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 LIG4P49917 911 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ARPP19P56211 112 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ROR1Q01973 937 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
SHMT2-235ENST00000557740 SLC8B1Q6J4K2 584 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ZNF280DQ6N043 979 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 MTSS1LQ765P7 747 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 HAUS6Q7Z4H7 955 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ITFG1Q8TB96 612 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 TBC1D17Q9HA65 648 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 ARHGEF3Q9NR81 526 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 HCFC1R1Q9NWW0 138 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 DOCK8Q8NF50 2099 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 VWA8A3KMH1 1905 aa15.97■□□□□ 0.15
SHMT2-235ENST00000557740 VPS37CA5D8V6 355 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 MEFVO15553 781 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 TBCAO75347 108 aaKnown RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 PLCG1P19174 1290 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 SCP2P22307 547 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 LONP1P36776 959 aaKnown RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 KYAT1Q16773 422 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 SLC10A6Q3KNW5 377 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 CTXN3Q4LDR2 81 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 ARSHQ5FYA8 562 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 PARM1Q6UWI2 310 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 MYCT1Q8N699 235 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 APPL2Q8NEU8 664 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 ZNF461Q8TAF7 563 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 ING5Q8WYH8 240 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 FGF14Q92915 247 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 SUSD3Q96L08 255 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 PLEKHA5Q9HAU0 1116 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 SLC2A4RGQ9NR83 387 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 DNMT3BQ9UBC3 853 aaKnown RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 TUBGCP4Q9UGJ1 667 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 KCNH3Q9ULD8 1083 aa15.96■□□□□ 0.15
SHMT2-235ENST00000557740 MRPS23Q9Y3D9 190 aaKnown RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-235ENST00000557740 WDR27A2RRH5 827 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 KARSQ15046 597 aaKnown RBP15.95■□□□□ 0.14
SHMT2-235ENST00000557740 SF3A1Q15459 793 aaKnown RBP15.95■□□□□ 0.14
SHMT2-235ENST00000557740 NPAS3Q8IXF0 933 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 DTWD2Q8NBA8 298 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 RAD54LQ92698 747 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 ZHX3Q9H4I2 956 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 FBXL5Q9UKA1 691 aa15.95■□□□□ 0.14
SHMT2-235ENST00000557740 ARHGEF37A1IGU5 675 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 PROB1E7EW31 1015 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 XPOTO43592 962 aaKnown RBP15.94■□□□□ 0.14
SHMT2-235ENST00000557740 ABLIM3O94929 683 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 RHOP08100 348 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 CPB1P15086 417 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 ATF2P15336 505 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 PDCP20941 246 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 MARCKSP29966 332 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-235ENST00000557740 NBL1P41271 181 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 SPAG1Q07617 926 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 MCM6Q14566 821 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 ANGPT1Q15389 498 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 TPGS2Q68CL5 300 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 ELMOD1Q8N336 334 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 LARP4BQ92615 738 aaKnown RBP15.94■□□□□ 0.14
SHMT2-235ENST00000557740 SHDQ96IW2 340 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 KXD1Q9BQD3 176 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 CYP4F11Q9HBI6 524 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 BLOC1S4Q9NUP1 217 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 TBX20Q9UMR3 447 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 UBQLN1Q9UMX0 589 aaKnown RBP15.94■□□□□ 0.14
SHMT2-235ENST00000557740 PCDHB8Q9UN66 801 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 INSL5Q9Y5Q6 135 aa15.94■□□□□ 0.14
SHMT2-235ENST00000557740 TTC26A0AVF1 554 aa15.93■□□□□ 0.14
SHMT2-235ENST00000557740 TRAK2O60296 914 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms