RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PSMC2P35998 433 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CYP2J2P51589 502 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CYP24A1Q07973 514 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 SMC1AQ14683 1233 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 SEZ6Q53EL9 994 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 GLRA4Q5JXX5 417 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 ZBTB41Q5SVQ8 909 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 ZC3H3Q8IXZ2 948 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 VPS52Q8N1B4 723 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 GDPD5Q8WTR4 605 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CEP63Q96MT8 703 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 FAM161BQ96MY7 647 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 NSUN3Q9H649 340 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 ALG13Q9NP73 1137 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 CHST7Q9NS84 486 aa14.82□□□□□ -0.04
SHMT2-234ENST00000557703 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
SHMT2-234ENST00000557703 KIAA1671Q9BY89 1806 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 PDCD11Q14690 1871 aaKnown RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 ANO9A1A5B4 782 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 PPP1R3GB7ZBB8 358 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 PODXLO00592 558 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 SYN3O14994 580 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 STX10O60499 249 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 TNNC2P02585 160 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 IGFBP4P22692 258 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 CLCNKBP51801 687 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 FUT10Q6P4F1 479 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 TMC7Q7Z402 723 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 CBWD2Q8IUF1 395 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 LRRC52Q8N7C0 313 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 MRPL43Q8N983 215 aaKnown RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 HERC2P3Q9BVR0 1158 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 ZBP1Q9H171 429 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 IKZF4Q9H2S9 585 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 METTL14Q9HCE5 456 aaKnown RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 MRPL17Q9NRX2 175 aaKnown RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 INTS13Q9NVM9 706 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 MARCH5Q9NX47 278 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 DPP3Q9NY33 737 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 HCSTQ9UBK5 93 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 DPP7Q9UHL4 492 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 MAPK8IP1Q9UQF2 711 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 PRG3Q9Y2Y8 225 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-234ENST00000557703 NUB1Q9Y5A7 615 aa14.81□□□□□ -0.04
SHMT2-234ENST00000557703 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 NT5C1B-RDH14C9J2C7 533 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 PIRO00625 290 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 B4GALT3O60512 393 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 FAM163BP0C2L3 166 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 TMEM191BP0C7N4 346 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
SHMT2-234ENST00000557703 KRT13P13646 458 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 BMP6P22004 513 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 ERCC5P28715 1186 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-234ENST00000557703 GTF2H1P32780 548 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 AARSP49588 968 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHMT2-234ENST00000557703 DSG1Q02413 1049 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 SOX4Q06945 474 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-234ENST00000557703 PAK1Q13153 545 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 CAMK1Q14012 370 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 ADGRE1Q14246 886 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 KIAA1841Q6NSI8 718 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 SPRED2Q7Z698 418 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 FILIP1Q7Z7B0 1213 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 APPL2Q8NEU8 664 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 SPATA18Q8TC71 538 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 MICAL1Q8TDZ2 1067 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 PARD3BQ8TEW8 1205 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 MYLIPQ8WY64 445 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 ERCC4Q92889 916 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-234ENST00000557703 SUSD3Q96L08 255 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 ZNF560Q96MR9 790 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 CGRRF1Q99675 332 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 TCF25Q9BQ70 676 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 TTPALQ9BTX7 342 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 EMILIN2Q9BXX0 1053 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 PDE11AQ9HCR9 933 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 FNIP2Q9P278 1114 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 RWDD2AQ9UIY3 292 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 DSEQ9UL01 958 aa14.8□□□□□ -0.04
SHMT2-234ENST00000557703 RBAK-RBAKDNI3L0D1 243 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 KIF4AO95239 1232 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 URODP06132 367 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 NFICP08651 508 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 TNNI1P19237 187 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 PBX3P40426 434 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 GLUD2P49448 558 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 NLRP12P59046 1061 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 RBP5P82980 135 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 TFAMQ00059 246 aaKnown RBP14.79□□□□□ -0.04
SHMT2-234ENST00000557703 MYO1EQ12965 1108 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 C9orf57Q5W0N0 161 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms