RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	SEMA3B	Q13214	749 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	PTPA	Q15257	358 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	ARHGAP29	Q52LW3	1261 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	PMS2CL	Q68D20	193 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	ANKS3	Q6ZW76	656 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	MIER3	Q7Z3K6	550 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	EXOC8	Q8IYI6	725 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	HDDC3	Q8N4P3	179 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	FANCB	Q8NB91	859 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	RNF149	Q8NC42	400 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	LEMD2	Q8NC56	503 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	RDM1	Q8NG50	284 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	MDM1	Q8TC05	714 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	TMEM143	Q96AN5	459 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	TEKT3	Q9BXF9	490 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	NUSAP1	Q9BXS6	441 aa	Known RBP	10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	UNC45A	Q9H3U1	944 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	CYP4F11	Q9HBI6	524 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	SNTG2	Q9NY99	539 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	EBF1	Q9UH73	591 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	SHROOM3	Q8TF72	1996 aa		10.45	□□□□□ -0.74
PABPN1-208	ENST00000557702	PDCD11	Q14690	1871 aa	Known RBP	10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ZMYM2	Q9UBW7	1377 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	hCG_1984214	I3L0E3	225 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702		J3QKU1	62 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	DPYSL4	O14531	572 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	MSH4	O15457	936 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ASAP2	O43150	1006 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	MOSPD3	O75425	235 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	APBB3	O95704	486 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ATF2	P15336	505 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	GJA1	P17302	382 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	FGFR3	P22607	806 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	CIITA	P33076	1130 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	HNRNPD	Q14103	355 aa	Known RBP	10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	TEAD2	Q15562	447 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	USP39	Q53GS9	565 aa	Known RBP	10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	TRIM61	Q5EBN2	209 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	LRCH2	Q5VUJ6	765 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	RAB11FIP4	Q86YS3	637 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	HS6ST3	Q8IZP7	471 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ZNF713	Q8N859	430 aa	Predicted RBP	10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	PIGK	Q92643	395 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	RSPRY1	Q96DX4	576 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ZFYVE19	Q96K21	471 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	MTA3	Q9BTC8	594 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	ASAH2	Q9NR71	780 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	BARHL2	Q9NY43	387 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	DACH1	Q9UI36	760 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	RCAN3	Q9UKA8	241 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	SLC12A7	Q9Y666	1083 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	EML5	Q05BV3	1969 aa		10.44	□□□□□ -0.74
PABPN1-208	ENST00000557702	INO80B-WBP1	J3KQ70	363 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	ABLIM3	O94929	683 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	TH	P07101	528 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	DHPS	P49366	369 aa	Predicted RBP	10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	DGKE	P52429	567 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	FAM193A	P78312	1265 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	PLCB2	Q00722	1185 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	ROR1	Q01973	937 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	ITPRIPL2	Q3MIP1	535 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	TMEM196	Q5HYL7	178 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	PLA2G4F	Q68DD2	849 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	ANO5	Q75V66	913 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	TCEAL8	Q8IYN2	117 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	LENG9	Q96B70	501 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	HNRNPAB	Q99729	332 aa	Known RBP	10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	INVS	Q9Y283	1065 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	INSL5	Q9Y5Q6	135 aa		10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702		V9GY48	417 aa	Predicted RBP	10.43	□□□□□ -0.74
PABPN1-208	ENST00000557702	ZNF462	Q96JM2	2506 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	PI4KA	P42356	2102 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	SH2B2	O14492	632 aa	Predicted RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ATXN7	O15265	892 aa	Predicted RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ARHGAP6	O43182	974 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	TRAPPC3	O43617	180 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	PRC1	O43663	620 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	RNF40	O75150	1001 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	B3GAT3	O94766	335 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	NPTXR	O95502	500 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ENG	P17813	658 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ARF4	P18085	180 aa	Predicted RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	TKT	P29401	623 aa	Known RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ATXN3	P54252	364 aa	Predicted RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	EPHA5	P54756	1037 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ARPP19	P56211	112 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	PTEN	P60484	403 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	PSMC5	P62195	406 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	SLC8B1	Q6J4K2	584 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	FSTL4	Q6MZW2	842 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	SLC27A1	Q6PCB7	646 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	SYT13	Q7L8C5	426 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	FERMT3	Q86UX7	667 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	GPIHBP1	Q8IV16	184 aa		10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.42	□□□□□ -0.74
PABPN1-208	ENST00000557702	LSM14A	Q8ND56	463 aa	Known RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms