RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 IFT74Q96LB3 600 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 HINFPQ9BQA5 517 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 PDZD7Q9H5P4 517 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 DLGAP2Q9P1A6 1054 aa18.21■□□□□ 0.51
NEK9-211ENST00000557673 MTCL1Q9Y4B5 1905 aaKnown RBP18.21■□□□□ 0.51
NEK9-211ENST00000557673 DOCK8Q8NF50 2099 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 N4BP3O15049 544 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 SP9P0CG40 484 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 STAT6P42226 847 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 PFKPQ01813 784 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 E2F4Q16254 413 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 PSMD5Q16401 504 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 UVSSAQ2YD98 709 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 RRAGBQ5VZM2 374 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 ADALQ6DHV7 355 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 RINT1Q6NUQ1 792 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 RTL10Q7L3V2 364 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 DAW1Q8N136 415 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 RUBCNQ92622 972 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 CLSTN3Q9BQT9 956 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 ADPGKQ9BRR6 497 aa18.2■□□□□ 0.5
NEK9-211ENST00000557673 HIP1RO75146 1068 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 C8AP07357 584 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 POU2F2P09086 479 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 GUCY2CP25092 1073 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 GPC5P78333 572 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 PRKCQQ04759 706 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 MAPK7Q13164 816 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 MCM6Q14566 821 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 EEF1DP3Q658K8 133 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 PARM1Q6UWI2 310 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 C1orf186Q6ZWK4 172 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 GPBP1Q86WP2 473 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 PDILTQ8N807 584 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 LNX1Q8TBB1 728 aaPredicted RBP18.19■□□□□ 0.5
NEK9-211ENST00000557673 BCO2Q9BYV7 579 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 FAM13BQ9NYF5 915 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 KCND2Q9NZV8 630 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
NEK9-211ENST00000557673 CACNA1AO00555 2505 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 A0A1W2PQ27 194 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 A0A1W2PQ64 194 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 A0A1W2PQD8 194 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 KANSL1LA0AUZ9 987 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 CASTOR2A6NHX0 329 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 ACKR2O00590 384 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 KIF4AO95239 1232 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 PFKFB1P16118 471 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 CMA1P23946 247 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 EFNA5P52803 228 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 PEX3P56589 373 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 RSPO2Q6UXX9 243 aaPredicted RBP18.18■□□□□ 0.5
NEK9-211ENST00000557673 KIAA2013Q8IYS2 634 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 HASPINQ8TF76 798 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 FGF13Q92913 245 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 FGF14Q92915 247 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 PAAF1Q9BRP4 392 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 HPSEQ9Y251 543 aa18.18■□□□□ 0.5
NEK9-211ENST00000557673 DCHS1Q96JQ0 3298 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 FAM237AA0A1B0GTK4 181 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 CCDC169A6NNP5 214 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 KINO60870 393 aaKnown RBP18.17■□□□□ 0.5
NEK9-211ENST00000557673 MAGEA9P43362 315 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 NPTX2P47972 431 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 RAD51AP2Q09MP3 1159 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
NEK9-211ENST00000557673 PUM1Q14671 1186 aaKnown RBP eCLIP18.17■□□□□ 0.5
NEK9-211ENST00000557673 MLF2Q15773 248 aaPredicted RBP18.17■□□□□ 0.5
NEK9-211ENST00000557673 ZNF528Q3MIS6 628 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 SLC44A4Q53GD3 710 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 ARSHQ5FYA8 562 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 NT5DC1Q5TFE4 455 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
NEK9-211ENST00000557673 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 APBB1IPQ7Z5R6 666 aaPredicted RBP18.17■□□□□ 0.5
NEK9-211ENST00000557673 DRC1Q96MC2 740 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 FOXQ1Q9C009 403 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 CUEDC2Q9H467 287 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 SNTG2Q9NY99 539 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 FBXO4Q9UKT5 387 aa18.17■□□□□ 0.5
NEK9-211ENST00000557673 SFI1A8K8P3 1242 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 PTGESO14684 152 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 CCL16O15467 120 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 POLR2DO15514 142 aaKnown RBP18.16■□□□□ 0.5
NEK9-211ENST00000557673 LAMTOR5O43504 91 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 TRAPPC3O43617 180 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 RECQL4O94761 1208 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 DMP1Q13316 513 aaPredicted RBP18.16■□□□□ 0.5
NEK9-211ENST00000557673 RAB33AQ14088 237 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
NEK9-211ENST00000557673 FSIP1Q8NA03 581 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 SLC7A14Q8TBB6 771 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 DHX58Q96C10 678 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 RMDN1Q96DB5 314 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 REEP2Q9BRK0 252 aa18.16■□□□□ 0.5
NEK9-211ENST00000557673 RPP25Q9BUL9 199 aaKnown RBP18.16■□□□□ 0.5
NEK9-211ENST00000557673 DDX23Q9BUQ8 820 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms