RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SPAG1Q07617 926 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 BMS1Q14692 1282 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 HABP4Q5JVS0 413 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 PDE12Q6L8Q7 609 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 LRRC52Q8N7C0 313 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 RDH13Q8NBN7 331 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 TMEM169Q96HH4 297 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF560Q96MR9 790 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 NKX2-4Q9H2Z4 354 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 PLAGL2Q9UPG8 496 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 PLXNA4Q9HCM2 1894 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ANO9A1A5B4 782 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 LCHNA4D1U4 455 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 P4HA2O15460 535 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 NFICP08651 508 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 CTNNB1P35222 781 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 PBX2P40425 430 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF165P49910 485 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF445P59923 1031 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 TFAMQ00059 246 aaKnown RBP15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 UPP1Q16831 310 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 GLRA4Q5JXX5 417 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 SMYD5Q6GMV2 418 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF280BQ86YH2 543 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 EFCAB13Q8IY85 973 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 SLC39A11Q8N1S5 342 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 ANKRD20A12PQ8NF67 263 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 IGSF21Q96ID5 467 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 DNAJC25Q9H1X3 360 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 DPP3Q9NY33 737 aa15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
SUPT16H-208ENST00000557652 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 H3BNC9 293 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 PIRO00625 290 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 NRP1O14786 923 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 ATICP31939 592 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 OR1G1P47890 313 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 SLC11A1P49279 550 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 RBP5P82980 135 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 CETN1Q12798 172 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 PDXDC1Q6P996 788 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 TRIM59Q8IWR1 403 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 FBXO22Q8NEZ5 403 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 SPATA18Q8TC71 538 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 TAF4BQ92750 862 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 MED15Q96RN5 788 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 TMEM8AQ9HCN3 771 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 LMCD1Q9NZU5 365 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 ADAM28Q9UKQ2 775 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 NFE2L3Q9Y4A8 694 aa15.24■□□□□ 0.03
SUPT16H-208ENST00000557652 VWA8A3KMH1 1905 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 LRRIQ3A6PVS8 624 aaPredicted RBP15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 PODXLO00592 558 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 MYOGP15173 224 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 AARSP49588 968 aaKnown RBP eCLIP15.23■□□□□ 0.036e-8■■■■■ 39.3
SUPT16H-208ENST00000557652 TPM4P67936 248 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 ZACNQ401N2 412 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 C9orf57Q5W0N0 161 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 KRT39Q6A163 491 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 C11orf57Q6ZUT1 292 aaPredicted RBP15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 DDX53Q86TM3 631 aaKnown RBP15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 FAM124BQ9H5Z6 455 aaPredicted RBP15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 MYO7AQ13402 2215 aa15.23■□□□□ 0.03
SUPT16H-208ENST00000557652 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CASTOR2A6NHX0 329 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 BECN2A8MW95 431 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 SYN3O14994 580 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 TADA2AO75478 443 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 FGF18O76093 207 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 B3GAT3O94766 335 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 C4BPAP04003 597 aaKnown RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 TPM2P07951 284 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 TAF6P49848 677 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CLCNKBP51801 687 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CREMQ03060 361 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 TRPC3Q13507 836 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 PTPROQ16827 1216 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 SV2CQ496J9 727 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CDKAL1Q5VV42 579 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms