RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 HEXIM2Q96MH2 286 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 DCLRE1BQ9H816 532 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 FAM153AQ9UHL3 310 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 UBE2QL1A1L167 161 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GSAPA4D1B5 854 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 LINC00523Q86TU6 105 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 BDH2Q9BUT1 245 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 PCDHA7Q9UN72 937 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 KNTC1P50748 2209 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TTLL1O95922 423 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 MLH1P40692 756 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 PTK6Q13882 451 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 RASSF6Q6ZTQ3 369 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 STAG2Q8N3U4 1231 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ABCB6Q9NP58 842 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 A0A0X1KG70 313 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 VWA5AO00534 786 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 BCL10O95999 233 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TMEM237Q96Q45 408 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ROPN1BQ9BZX4 212 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ROPN1Q9HAT0 212 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TMEM63CQ9P1W3 806 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 PDS5AQ29RF7 1337 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 DDR2Q16832 855 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SHCBP1Q8NEM2 672 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 RHBDL2Q9NX52 303 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SYTL3Q4VX76 610 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SPATA17Q96L03 361 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 UBN2Q6ZU65 1347 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 HUS1O60921 280 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 TNFAIP8O95379 198 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 IFNGR2P38484 337 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 TRIM25Q14258 630 aaKnown RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 CENPTQ96BT3 561 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ARMT1Q9H993 441 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 MYH8P13535 1937 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SNAPC5O75971 98 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 PPP2R1BP30154 601 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 EIF2B2P49770 351 aaKnown RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ITGADQ13349 1161 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 NME9Q86XW9 330 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 STK39Q9UEW8 545 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SLC25A13Q9UJS0 675 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 KRT34O76011 436 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 CHRNB3Q05901 458 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 LRRC74AQ0VAA2 488 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 MGAT4AQ9UM21 535 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 PPP1R37O75864 691 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 FLT3P36888 993 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 EIF2S3P41091 472 aaKnown RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 EFR3AQ14156 821 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 DGCR14Q96DF8 476 aaKnown RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 IPPQ9Y573 584 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 DENND4BO75064 1496 aaPredicted RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 OSBPP22059 807 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 DLGAP5Q15398 846 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 KLHL4Q9C0H6 718 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 TNKSO95271 1327 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SUPT3HB4E1H0 165 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ICA1Q05084 483 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ANKS6Q68DC2 871 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 PIK3C3Q8NEB9 887 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 TRAPPC9Q96Q05 1148 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 OXCT2Q9BYC2 517 aaPredicted RBP9.24□□□□□ -0.93
SYNE3-205ENST00000557275 H0YIN7 160 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 APOL1O14791 398 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 CDC42EP1Q00587 391 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF235Q14590 738 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 OR6P1Q8NGX9 317 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 RACGAP1Q9H0H5 632 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 IRAK3Q9Y616 596 aa9.24□□□□□ -0.93
SYNE3-205ENST00000557275 SLC26A4O43511 780 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CCNE1P24864 410 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 DGUOKQ16854 277 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 URGCPQ8TCY9 931 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 MMADHCQ9H3L0 296 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC189A1A4V9 331 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 SEMA3DO95025 777 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 PPARDQ03181 441 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TRMT5Q32P41 509 aaKnown RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 CC2D1AQ6P1N0 951 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 UQCRBP14927 111 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 MYL12AP19105 171 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 HIST2H2ACQ16777 129 aaPredicted RBP9.23□□□□□ -0.93
SYNE3-205ENST00000557275 HIST2H2AA3Q6FI13 130 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 TRPM5Q9NZQ8 1165 aa9.23□□□□□ -0.93
SYNE3-205ENST00000557275 MFAP3LO75121 409 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms