RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 ZMYND8Q9ULU4 1186 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 NAALADL1Q9UQQ1 740 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 ZMYM2Q9UBW7 1377 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 EDF1O60869 148 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 CYP1A2P05177 515 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 WDR4P57081 412 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 SF3A3Q12874 501 aaKnown RBP eCLIP13.36□□□□□ -0.27
APEX1-216ENST00000557159 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 Q4G0T1 1027 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 TMEM154Q6P9G4 183 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 GDAP1Q8TB36 358 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 C10orf82Q8WW14 230 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 KIFAP3Q92845 792 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 POLR3CQ9BUI4 534 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 SSU72Q9NP77 194 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 NINJ2Q9NZG7 142 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.36□□□□□ -0.27
APEX1-216ENST00000557159 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SCN4AP35499 1836 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 SPDYE5A6NIY4 337 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 PMM2O15305 246 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 THAP12O43422 761 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 ZWINTO95229 277 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 FTLP02792 175 aaPredicted RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 EPHX2P34913 555 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 MARCKSL1P49006 195 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 KRT17Q04695 432 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 GNPTABQ3T906 1256 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 AADACL2Q6P093 401 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 TRPM4Q8TD43 1214 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 FAM20AQ96MK3 541 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 DENND2DQ9H6A0 471 aaPredicted RBP13.35□□□□□ -0.27
APEX1-216ENST00000557159 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
APEX1-216ENST00000557159 TBCAO75347 108 aaKnown RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 GAS8O95995 478 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 NFIAQ12857 509 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 UBE2SQ16763 222 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 MUM1Q2TAK8 710 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
APEX1-216ENST00000557159 TRABD2AQ86V40 505 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 LRRC8CQ8TDW0 803 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 GORASP1Q9BQQ3 440 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 HAO1Q9UJM8 370 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 SLC4A7Q9Y6M7 1214 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 MAGEA13PA6NCF6 341 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 PPP1R11O60927 126 aaPredicted RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 RNF8O76064 485 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 GCNT3O95395 438 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 TARSP26639 723 aaKnown RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 CHKAP35790 457 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 TUBP50607 506 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 CENPCQ03188 943 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 CUL3Q13618 768 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 KPNB1Q14974 876 aaKnown RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 CYP4X1Q8N118 509 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
APEX1-216ENST00000557159 NCSTNQ92542 709 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 GATA6Q92908 595 aa13.34□□□□□ -0.27
APEX1-216ENST00000557159 NR1H4Q96RI1 486 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms