RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CASP5P51878 434 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 STX17P56962 302 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF445P59923 1031 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 GPLD1P80108 840 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 PPFIA1Q13136 1202 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 EMC2Q15006 297 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 KCNA10Q16322 511 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 KIAA0753Q2KHM9 967 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ANO6Q4KMQ2 910 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MARCH8Q5T0T0 291 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 FAM102BQ5T8I3 360 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 NT5DC1Q5TFE4 455 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SASS6Q6UVJ0 657 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 LRSAM1Q6UWE0 723 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 RUFY4Q6ZNE9 571 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 UNC13DQ70J99 1090 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 OTUD6AQ7L8S5 288 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ATCAYQ86WG3 371 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 RGL4Q8IZJ4 473 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 KIAA0895Q8NCT3 520 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SPATA20Q8TB22 786 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 PIK3R5Q8WYR1 880 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 CCDC43Q96MW1 224 aaKnown RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MED15Q96RN5 788 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 FIZ1Q96SL8 496 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MTG1Q9BT17 334 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 POLR3FQ9H1D9 316 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 RBSNQ9H1K0 784 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SUGCTQ9HAC7 445 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MAGEF1Q9HAY2 307 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 NRBP2Q9NSY0 501 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ERAP1Q9NZ08 941 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 HDAC6Q9UBN7 1215 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 COG5Q9UP83 839 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 PCDHA2Q9Y5H9 948 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ADGRA3Q8IWK6 1321 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 FRMD3A2A2Y4 597 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TRIM49BA6NDI0 452 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TLR3O15455 904 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TREHO43280 583 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 HBP1O60381 514 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 DKC1O60832 514 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TBCAO75347 108 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 MAFO75444 373 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 PRPF6O94906 941 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 C22orf31O95567 290 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 PDGFAP04085 211 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 EDN1P05305 212 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 RARAP10276 462 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 GLRA2P23416 452 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 KLRC1P26715 233 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 HOXD13P35453 343 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 ARL2P36404 184 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 PRCPP42785 496 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 KCNQ1P51787 676 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 POLGP54098 1239 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 PEX3P56589 373 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 NKX3-2P78367 333 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 AMPD3Q01432 767 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TFF2Q03403 129 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 EHHADHQ08426 723 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TMEM62Q0P6H9 643 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 STX1AQ16623 288 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 ZC2HC1CQ53FD0 456 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 HERC4Q5GLZ8 1057 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 FAM47CQ5HY64 1035 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF484Q5JVG2 852 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF658Q5TYW1 1059 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 KLHL10Q6JEL2 608 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 EFCAB12Q6NXP0 572 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 NELFCDQ8IXH7 590 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 GJD3Q8N144 294 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 MYCT1Q8N699 235 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 LINC01465Q8N7H1 131 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 GPR152Q8TDT2 470 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 LMBR1Q8WVP7 490 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 WNT8BQ93098 351 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 FAM167AQ96KS9 214 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 FAM49AQ9H0Q0 323 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 TSPY26PQ9H489 355 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 DHX33Q9H6R0 707 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 ATP6V0A4Q9HBG4 840 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 SPC25Q9HBM1 224 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 EXOC1Q9NV70 894 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 CTNND2Q9UQB3 1225 aa5.84□□□□□ -1.47
ATXN3-244ENST00000556898 YBX2Q9Y2T7 364 aaKnown RBP5.84□□□□□ -1.47
ATXN3-244ENST00000556898 MUC3AQ02505 3323 aa5.84□□□□□ -1.48
ATXN3-244ENST00000556898 IGKV6-21A0A0C4DH24 114 aa5.83□□□□□ -1.48
ATXN3-244ENST00000556898 A0A0U1RQG5 324 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-244ENST00000556898 PVALEFA0A1B0GWK0 134 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms