RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 PSMG3-AS1Q96PY0 264 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 PIGSQ96S52 555 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 GAD1Q99259 594 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 LGMNQ99538 433 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 CSRNP2Q9H175 543 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 CAPN10Q9HC96 672 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 FBRSL1Q9HCM7 1045 aaKnown RBP4.79□□□□□ -1.64
ATXN3-242ENST00000556644 DNAAF2Q9NVR5 837 aaKnown RBP4.79□□□□□ -1.64
ATXN3-242ENST00000556644 MIOSQ9NXC5 875 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 MAP3K20Q9NYL2 800 aaKnown RBP4.79□□□□□ -1.64
ATXN3-242ENST00000556644 EBF1Q9UH73 591 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 PCOLCE2Q9UKZ9 415 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 F8P00451 2351 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 ICE1Q9Y2F5 2266 aa4.79□□□□□ -1.64
ATXN3-242ENST00000556644 CABIN1Q9Y6J0 2220 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 COL1A2P08123 1366 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 NAV3Q8IVL0 2385 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PALM3A6NDB9 673 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ZBTB5O15062 677 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 MOSPD3O75425 235 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 GJB3O75712 270 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 CCNE2O96020 404 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 C1RP00736 705 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 LRG1P02750 347 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 SERPINF2P08697 491 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 POU2F2P09086 479 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 CT47B1P0C2W7 299 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PTPN2P17706 415 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 NDUFV2P19404 249 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ATP4AP20648 1035 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 RAB27AP51159 221 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 DSC1Q08554 894 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 SLFN5Q08AF3 891 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 GRSF1Q12849 480 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 DRP2Q13474 957 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PKDCCQ504Y2 493 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 VPS53Q5VIR6 699 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 FAM171A1Q5VUB5 890 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 CEP85Q6P2H3 762 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 C11orf74Q86VG3 221 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 KBTBD3Q8NAB2 608 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 MDGA1Q8NFP4 955 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 SNIP1Q8TAD8 396 aaKnown RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 SMARCC2Q8TAQ2 1214 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 LNX1Q8TBB1 728 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PGBD4Q96DM1 585 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 CHFRQ96EP1 664 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ZFP42Q96MM3 310 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 KIF2CQ99661 725 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PAAF1Q9BRP4 392 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 COLEC11Q9BWP8 271 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 LRRCC1Q9C099 1032 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 IL21RQ9HBE5 538 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ADAM28Q9UKQ2 775 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 TNRC6BQ9UPQ9 1833 aaKnown RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 PCNX1Q96RV3 2341 aa4.78□□□□□ -1.64
ATXN3-242ENST00000556644 HELZP42694 1942 aaKnown RBP4.78□□□□□ -1.64
ATXN3-242ENST00000556644 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 NBASA2RRP1 2371 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 A0A087WZ62 844 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ARL5CA6NH57 179 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 PRRG1O14668 218 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 BRINP1O60477 761 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF623O75123 536 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TADA2AO75478 443 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SFPQP23246 707 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ELAVL4P26378 380 aaKnown RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TNFRSF8P28908 595 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF76P36508 570 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SEC13P55735 322 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TMPRSS3P57727 454 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TLE1Q04724 770 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 FCHO2Q0JRZ9 810 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ITGB3BPQ13352 177 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 NBR1Q14596 966 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ITPRIPL2Q3MIP1 535 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SWSAP1Q6NVH7 229 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SYT13Q7L8C5 426 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 CATSPER4Q7RTX7 472 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 GLRX5Q86SX6 157 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TBC1D10CQ8IV04 446 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SRRM1Q8IYB3 904 aaKnown RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 CCDC33Q8N5R6 958 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 LINC01465Q8N7H1 131 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SHKBP1Q8TBC3 707 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 NANOS1Q8WY41 292 aaKnown RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 RSPH1Q8WYR4 309 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TSC1Q92574 1164 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 EZH1Q92800 747 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 KIF1BPQ96EK5 621 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms