RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 KANSL3Q9P2N6 904 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 INSL6Q9Y581 213 aa18.84■□□□□ 0.61
TUBB3-211ENST00000556536 PTPRSQ13332 1948 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 FOSL2P15408 326 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 EEF1GP26641 437 aaKnown RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 GCLMP48507 274 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 RNASELQ05823 741 aaKnown RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 BTG3Q14201 252 aaPredicted RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 LRRC43Q8N309 656 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 TSPAN18Q96SJ8 248 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 MRPL9Q9BYD2 267 aaKnown RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 TTYH1Q9H313 450 aaPredicted RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 CWH43Q9H720 699 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 NRDE2Q9H7Z3 1164 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 DNAJB4Q9UDY4 337 aa18.83■□□□□ 0.6
TUBB3-211ENST00000556536 UBQLN1Q9UMX0 589 aaKnown RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 MRPL42Q9Y6G3 142 aaKnown RBP18.83■□□□□ 0.6
TUBB3-211ENST00000556536 MUC3AQ02505 3323 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 TMEM265A0A087WTH1 108 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 CASTOR2A6NHX0 329 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 GOLGA6L19H0YKK7 550 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 TMEM191BP0C7N4 346 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 DSC1Q08554 894 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 TUSC3Q13454 348 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 KRT31Q15323 416 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 DUOXA2Q1HG44 320 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 USP37Q86T82 979 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 COLGALT2Q8IYK4 626 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 BEST2Q8NFU1 509 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 SP7Q8TDD2 431 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-211ENST00000556536 RSPH1Q8WYR4 309 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 RABGGTAQ92696 567 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 TUBGCP2Q9BSJ2 902 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 SLC38A7Q9NVC3 462 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 DPP3Q9NY33 737 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 TAB2Q9NYJ8 693 aa18.82■□□□□ 0.6
TUBB3-211ENST00000556536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.82■□□□□ 0.6
TUBB3-211ENST00000556536 ARHGEF15O94989 841 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CYP3A5P20815 502 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CDK11BP21127 795 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 IGFBP6P24592 240 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 PBX2P40425 430 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CBWD6Q4V339 395 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CBWD3Q5JTY5 395 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CBWD5Q5RIA9 395 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 TDRD10Q5VZ19 366 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 C15orf39Q6ZRI6 1047 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 SV2AQ7L0J3 742 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 TRAPPC11Q7Z392 1133 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CXorf38Q8TB03 319 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 CACTINQ8WUQ7 758 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 ANKRD36BP1Q96IX9 119 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 FAM193BQ96PV7 902 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 LIMA1Q9UHB6 759 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
TUBB3-211ENST00000556536 YBX2Q9Y2T7 364 aaKnown RBP18.81■□□□□ 0.6
TUBB3-211ENST00000556536 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.8■□□□□ 0.6
TUBB3-211ENST00000556536 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.8■□□□□ 0.6
TUBB3-211ENST00000556536 PPEF2O14830 753 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 XPOTO43592 962 aaKnown RBP18.8■□□□□ 0.6
TUBB3-211ENST00000556536 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
TUBB3-211ENST00000556536 TNNC2P02585 160 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 LINC00271P0C7V0 271 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 GTF2H1P32780 548 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 PBX3P40426 434 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 SLC11A1P49279 550 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 AP3M2P53677 418 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 TPM4P67936 248 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 KCNH2Q12809 1159 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 MAN2A1Q16706 1144 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 ZACNQ401N2 412 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 MIIPQ5JXC2 388 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 FIBCD1Q8N539 461 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 PCDHA11Q9Y5I1 949 aa18.8■□□□□ 0.6
TUBB3-211ENST00000556536 F8W810 466 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 STX10O60499 249 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 VNN1O95497 513 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-211ENST00000556536 AFPP02771 609 aaKnown RBP18.79■□□□□ 0.6
TUBB3-211ENST00000556536 ITGB3P05106 788 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 PRKCSHP14314 528 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-211ENST00000556536 LRPAP1P30533 357 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 OR1G1P47890 313 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 FMO5P49326 533 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 CLCNKBP51801 687 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 COPB1P53618 953 aaKnown RBP18.79■□□□□ 0.6
TUBB3-211ENST00000556536 BCAR1P56945 870 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 BIRC3Q13489 604 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 VWA3BQ502W6 1294 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 C9orf57Q5W0N0 161 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 VPS16Q9H269 839 aa18.79■□□□□ 0.6
TUBB3-211ENST00000556536 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms