RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 LIG4P49917 911 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 SOX4Q06945 474 aaPredicted RBP13.75□□□□□ -0.21
SNX6-207ENST00000556303 TDGQ13569 410 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 MRPL58Q14197 206 aaKnown RBP13.75□□□□□ -0.21
SNX6-207ENST00000556303 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 CCDC73Q6ZRK6 1079 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 MAP4K3Q8IVH8 894 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 APPL2Q8NEU8 664 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 HVCN1Q96D96 273 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 EPSTI1Q96J88 318 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
SNX6-207ENST00000556303 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 GOLGA2P5Q9HBQ8 144 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
SNX6-207ENST00000556303 A0A0B4J269 797 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 OGTO15294 1046 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 C8AP07357 584 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 HARSP12081 509 aaKnown RBP13.74□□□□□ -0.21
SNX6-207ENST00000556303 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
SNX6-207ENST00000556303 OR1D2P34982 312 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
SNX6-207ENST00000556303 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
SNX6-207ENST00000556303 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 ZNF461Q8TAF7 563 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 SUSD3Q96L08 255 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 UBQLN1Q9UMX0 589 aaKnown RBP13.74□□□□□ -0.21
SNX6-207ENST00000556303 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 STYXL1Q9Y6J8 313 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 DOCK8Q8NF50 2099 aa13.74□□□□□ -0.21
SNX6-207ENST00000556303 MEFVO15553 781 aaPredicted RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 FAM189A1O60320 539 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 CXCL8P10145 99 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 GAP43P17677 238 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 TKTP29401 623 aaKnown RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 AXDND1Q5T1B0 1012 aaPredicted RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 ZNF720Q7Z2F6 126 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 RPF1Q9H9Y2 349 aaKnown RBP13.73□□□□□ -0.21
SNX6-207ENST00000556303 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 DERAQ9Y315 318 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
SNX6-207ENST00000556303 ARHGEF37A1IGU5 675 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ADAM12O43184 909 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
SNX6-207ENST00000556303 PPP6R2O75170 966 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ABLIM3O94929 683 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ASGR2P07307 311 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 LAMP2P13473 410 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ATF2P15336 505 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 AVPR2P30518 371 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ELF1P32519 619 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 BRCC3P46736 316 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 PTPN5P54829 565 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 POSTNQ15063 836 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 FEZF2Q8TBJ5 459 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 DDX12PQ92771 950 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 C18orf25Q96B23 403 aaPredicted RBP13.72□□□□□ -0.21
SNX6-207ENST00000556303 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ZNF396Q96N95 335 aaPredicted RBP13.72□□□□□ -0.21
SNX6-207ENST00000556303 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 MSTO1Q9BUK6 570 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 ASB7Q9H672 318 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
SNX6-207ENST00000556303 CPSF3Q9UKF6 684 aaKnown RBP13.72□□□□□ -0.21
SNX6-207ENST00000556303 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
SNX6-207ENST00000556303 LACTBL1A8MY62 500 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 ANHXE9PGG2 379 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 M0QZQ0 153 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 FSHRP23945 695 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.21
SNX6-207ENST00000556303 NMT1P30419 496 aaKnown RBP13.71□□□□□ -0.21
SNX6-207ENST00000556303 MCM4P33991 863 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX6-207ENST00000556303 CLCN5P51795 746 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 ALCAMQ13740 583 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 ENOX2Q16206 610 aaKnown RBP13.71□□□□□ -0.21
SNX6-207ENST00000556303 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 SPATA1Q5VX52 437 aa13.71□□□□□ -0.21
SNX6-207ENST00000556303 ZNF280DQ6N043 979 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms