RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 GCOM2Q9BZD3 368 aaPredicted RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 NUB1Q9Y5A7 615 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 TACC1O75410 805 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 ZRANB2O95218 330 aaKnown RBP eCLIP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 KRT5P13647 590 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 TRIM58Q8NG06 486 aa20.06■□□□□ 0.8
SDR39U1-218ENST00000556262 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 CLTAP09496 248 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 HOXA11P31270 313 aaPredicted RBP20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 AP3M2P53677 418 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 NOP14P78316 857 aaKnown RBP20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 SURF1Q15526 300 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 TMEM40Q8WWA1 233 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 MTG1Q9BT17 334 aaPredicted RBP20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 NOCTQ9UK39 431 aaKnown RBP20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 SCN10AQ9Y5Y9 1956 aa20.05■□□□□ 0.8
SDR39U1-218ENST00000556262 B4GALT4O60513 344 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 H2AFZP0C0S5 128 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 TMEM191BP0C7N4 346 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 CHRNB2P17787 502 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 HOXC8P31273 242 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 VEGFBP49765 207 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 MYL6P60660 151 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 AMPD2Q01433 879 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 WHAMMP3Q1A5X7 153 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 H2AFVQ71UI9 128 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 ENOSF1Q7L5Y1 443 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 ZNF784Q8NCA9 323 aaPredicted RBP20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 NOX5Q96PH1 765 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 UPF3AQ9H1J1 476 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 SPC25Q9HBM1 224 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 XPNPEP3Q9NQH7 507 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 NFICP08651 508 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 DARSP14868 501 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 CYP11B1P15538 503 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 GALCP54803 685 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 CDC42EP1Q00587 391 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 CUL2Q13617 745 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 NBPF20Q3BBV1 942 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 SLC10A6Q3KNW5 377 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 RNF10Q8N5U6 811 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 PCDHB18PQ96TA0 734 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 SRRDQ9UH36 339 aa20.04■□□□□ 0.8
SDR39U1-218ENST00000556262 ADAMTS4O75173 837 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 ASS1P00966 412 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 MMEP08473 750 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 EIF4BP23588 611 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 TEX35Q5T0J7 233 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 JADE1Q6IE81 842 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 ADPGKQ9BRR6 497 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 CITO14578 2027 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 KPNA6O60684 536 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 SRGAP2O75044 1071 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 IL18RAPO95256 599 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 GNAT1P11488 350 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 ABCB4P21439 1286 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 ANKRD36BP1Q96IX9 119 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 ALS2CR12Q96Q35 445 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 CFHR5Q9BXR6 569 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 TRIP11Q15643 1979 aa20.03■□□□□ 0.8
SDR39U1-218ENST00000556262 PALMO75781 387 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 NPTXRO95502 500 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 TNNC2P02585 160 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 TUBBP07437 444 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 ACO1P21399 889 aaKnown RBP20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 PDE6CP51160 858 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 FMO1Q01740 532 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 TRPC3Q13507 836 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 SNX17Q15036 470 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 FAM81BQ96LP2 452 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 EIF2AQ9BY44 585 aaKnown RBP20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 IMPG2Q9BZV3 1241 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 JRKLQ9Y4A0 524 aa20.02■□□□□ 0.8
SDR39U1-218ENST00000556262 BRD3Q15059 726 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 KCNA10Q16322 511 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 PAPD7Q5XG87 772 aaKnown RBP20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 GDF6Q6KF10 455 aaPredicted RBP20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 DDX1Q92499 740 aaKnown RBP20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 GTF2IRD1Q9UHL9 959 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 BTNL10A8MVZ5 291 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 NCK2O43639 380 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 ASGR1P07306 291 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 NOP2P46087 812 aaKnown RBP20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 FAM47CQ5HY64 1035 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 C1orf127Q8N9H9 656 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 ACAP3Q96P50 834 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 CXCL16Q9H2A7 254 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 PCDHB4Q9Y5E5 795 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 SAR1BQ9Y6B6 198 aa20.01■□□□□ 0.79
SDR39U1-218ENST00000556262 MROH7Q68CQ1 1323 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 ANO9A1A5B4 782 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 CCDC151A5D8V7 595 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 KRT19P08727 400 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 MAP2K2P36507 400 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 CDR2Q01850 454 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 SGSM1Q2NKQ1 1148 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 TMEM270Q6UE05 265 aa20■□□□□ 0.79
SDR39U1-218ENST00000556262 THAP2Q9H0W7 228 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms