RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SLC10A6Q3KNW5 377 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 LARP1BQ659C4 914 aaKnown RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 GET4Q7L5D6 327 aaPredicted RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 KCNK18Q7Z418 384 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 GLYCTKQ8IVS8 523 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 LEMD2Q8NC56 503 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 HASPINQ8TF76 798 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 RSAD2Q8WXG1 361 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 CALML4Q96GE6 196 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 CDK5RAP3Q96JB5 506 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 SNX27Q96L92 541 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 ZMAT2Q96NC0 199 aaKnown RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 RUSC1Q9BVN2 902 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 DNMT3BQ9UBC3 853 aaKnown RBP8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 SIT1Q9Y3P8 196 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 NUB1Q9Y5A7 615 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 CDY1Q9Y6F8 540 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 NUMBLQ9Y6R0 609 aa8.51□□□□□ -1.05
PTCSC3-201ENST00000556013 C2orf16Q68DN1 1984 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 TTC26A0AVF1 554 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 PP2D1A8MPX8 630 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 STK25O00506 426 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 SLC16A4O15374 487 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ECI2O75521 394 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 OAZ2O95190 189 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 LRG1P02750 347 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 CFHP08603 1231 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 MAPTP10636 758 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 GJB2P29033 226 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 TKTP29401 623 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 MARCKSP29966 332 aaPredicted RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 LONP1P36776 959 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 UBA7P41226 1012 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 BRCC3P46736 316 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ZNF131P52739 623 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 NCKAP1LP55160 1127 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 GPC5P78333 572 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 FOXK2Q01167 660 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ROR1Q01973 937 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 SOX4Q06945 474 aaPredicted RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ANGPT1Q15389 498 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 TMEM119Q4V9L6 283 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 PABPC1LQ4VXU2 614 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 GLRA4Q5JXX5 417 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 BRAPQ7Z569 592 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 CEP120Q8N960 986 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 C3orf58Q8NDZ4 430 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 SLC7A14Q8TBB6 771 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 FGF14Q92915 247 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 NKD2Q969F2 451 aaPredicted RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ZBTB45Q96K62 511 aaPredicted RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 CCSER1Q9C0I3 900 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 GPR88Q9GZN0 384 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ST6GALNAC4Q9H4F1 302 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 TRPV5Q9NQA5 729 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 ARHGEF3Q9NR81 526 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 DLGAP2Q9P1A6 1054 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 HSFX1Q9UBD0 423 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 CACNG4Q9UBN1 327 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 AFF4Q9UHB7 1163 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 UBQLN1Q9UMX0 589 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 SMC3Q9UQE7 1217 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 FAM186AA6NE01 2351 aa8.5□□□□□ -1.05
PTCSC3-201ENST00000556013 DMDP11532 3685 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 KANSL1LA0AUZ9 987 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 WDR27A2RRH5 827 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 VWA3AA6NCI4 1184 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 PRR23AA6NEV1 266 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 M0QZQ0 153 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 NCAM2O15394 837 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 CCL16O15467 120 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 RHOP08100 348 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 MYBP10242 640 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 RFX1P22670 979 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 DDIT3P35638 169 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 AARSP49588 968 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 MLLT6P55198 1093 aaPredicted RBP8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 OSTNP61366 133 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 GTF2BQ00403 316 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 ZNF528Q3MIS6 628 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 SLC44A4Q53GD3 710 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 ARSHQ5FYA8 562 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 CYP4A22Q5TCH4 519 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 IQCEQ6IPM2 695 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 ZC3H14Q6PJT7 736 aaKnown RBP8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 PARM1Q6UWI2 310 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 HAUS6Q7Z4H7 955 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 C1orf210Q8IVY1 113 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
PTCSC3-201ENST00000556013 BEST2Q8NFU1 509 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms