RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CLDN3O15551 220 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ASAP2O43150 1006 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ZBED4O75132 1171 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ITIH2P19823 946 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 OSBPP22059 807 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CCND2P30279 289 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ADSSP30520 456 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 SLC1A1P43005 524 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 RPS6P62753 249 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 KRT17Q04695 432 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ENPEPQ07075 957 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CYP24A1Q07973 514 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 UGCGQ16739 394 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 DALRD3Q5D0E6 543 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 WDR44Q5JSH3 913 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 LIN9Q5TKA1 542 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 PLA2G4FQ68DD2 849 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MFSD5Q6N075 450 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ZNF677Q86XU0 584 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 GPD1LQ8N335 351 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MTMR14Q8NCE2 650 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MCPH1Q8NEM0 835 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 TAS1R2Q8TE23 839 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 EPS8L3Q8TE67 593 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 DYDC1Q8WWB3 177 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 SEMA4DQ92854 862 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ATP6V0A1Q93050 837 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 SNF8Q96H20 258 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 IFT74Q96LB3 600 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MFSD14AQ96MC6 490 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 GMLQ99445 158 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 MOV10L1Q9BXT6 1211 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 SLC38A10Q9HBR0 1119 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 AVENQ9NQS1 362 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 ZNF277Q9NRM2 450 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 KLC4Q9NSK0 619 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 PPP1R1BQ9UD71 204 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 ANAPC7Q9UJX3 599 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ARID2Q68CP9 1835 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 WDR81Q562E7 1941 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 TCRBV7S2A1N4TA0A589 114 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 FSCN2O14926 492 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ZBTB7AO95365 584 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 VIMP08670 466 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 FDX1P10109 184 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 GHRP10912 638 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ATF2P15336 505 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 GARTP22102 1010 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 NSFP46459 744 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 SLCO1A2P46721 670 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 IFI35P80217 286 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 SPP2Q13103 211 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ITIH4Q14624 930 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 LACTB2Q53H82 288 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 BRDTQ58F21 947 aaPredicted RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 SWT1Q5T5J6 900 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 PPP1R2P3Q6NXS1 205 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CEP128Q6ZU80 1094 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CCDC91Q7Z6B0 441 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 AGBL3Q8NEM8 1001 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 UHMK1Q8TAS1 419 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 ATXN2LQ8WWM7 1075 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 JDP2Q8WYK2 163 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 TAAR1Q96RJ0 339 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
TDP1-213ENST00000555880 KIFC3Q9BVG8 833 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 KIAA1683Q9H0B3 1180 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CCDC134Q9H6E4 229 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 KIAA1586Q9HCI6 787 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 LRRC4CQ9HCJ2 640 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 SLC40A1Q9NP59 571 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 ACP6Q9NPH0 428 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 PXMP2Q9NR77 195 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 GINM1Q9NU53 330 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 KCNG1Q9UIX4 513 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 PCDHB2Q9Y5E7 798 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 PCDHA10Q9Y5I2 948 aa7.47□□□□□ -1.21
TDP1-213ENST00000555880 CCT8L1PA6NM43 557 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 CCNE2O96020 404 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PSAPP07602 524 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SCP2P22307 547 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 CETN2P41208 172 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SCTRP47872 440 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 KCNJ1P48048 391 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PRSS12P56730 875 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 CENPCQ03188 943 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SNX1Q13596 522 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 AUHQ13825 339 aaKnown RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 TNFAIP1Q13829 316 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 PTK6Q13882 451 aa7.46□□□□□ -1.22
TDP1-213ENST00000555880 SIX1Q15475 284 aaPredicted RBP7.46□□□□□ -1.22
TDP1-213ENST00000555880 SNCBQ16143 134 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms