RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 LPPQ93052 612 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 GAD1Q99259 594 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 TMEM117Q9H0C3 514 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 INTS2Q9H0H0 1204 aaKnown RBP12.07□□□□□ -0.48
SHMT2-220ENST00000555634 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
SHMT2-220ENST00000555634 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-220ENST00000555634 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 APEX2Q9UBZ4 518 aa12.07□□□□□ -0.48
SHMT2-220ENST00000555634 TNRC18O15417 2968 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-220ENST00000555634 GBF1Q92538 1859 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 SMIM28A0A1B0GU29 152 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 ENPP3O14638 875 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 HLA-DRAP01903 254 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CCDC172P0C7W6 258 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 SYN1P17600 705 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 SCNN1GP51170 649 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 PPP3CAQ08209 521 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TUSC3Q13454 348 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 SGSM1Q2NKQ1 1148 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 LMBRD2Q68DH5 695 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TRIM65Q6PJ69 517 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 SV2AQ7L0J3 742 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TRAPPC11Q7Z392 1133 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TTC39CQ8N584 583 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 LRRC52Q8N7C0 313 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 HELQQ8TDG4 1101 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 LINC01599Q8WXQ3 324 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 DDX27Q96GQ7 796 aaKnown RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 POP1Q99575 1024 aaKnown RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 ZNHIT6Q9NWK9 470 aaKnown RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 CEP72Q9P209 647 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-220ENST00000555634 TSC2P49815 1807 aa12.06□□□□□ -0.48
SHMT2-220ENST00000555634 UPP2O95045 317 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 POLR2BP30876 1174 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 RGS19P49795 217 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 MFAP3P55082 362 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 NOP14P78316 857 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 FAM189BP81408 668 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 RAPGEF1Q13905 1077 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 FIGNQ5HY92 759 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 ZNF667Q5HYK9 610 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
SHMT2-220ENST00000555634 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 FAXDC2Q96IV6 333 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 ZFP42Q96MM3 310 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 YME1L1Q96TA2 773 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 EDEM3Q9BZQ6 932 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 PLCB1Q9NQ66 1216 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 TUBGCP4Q9UGJ1 667 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 SLC4A7Q9Y6M7 1214 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 COL4A6Q14031 1691 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 PTPRJQ12913 1337 aa12.05□□□□□ -0.48
SHMT2-220ENST00000555634 TBKBP1A7MCY6 615 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 INPPL1O15357 1258 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 POMCP01189 267 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 ACRP10323 421 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 FGFR1P11362 822 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 PON1P27169 355 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 TAF6P49848 677 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-220ENST00000555634 XKR4Q5GH76 650 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 ALKAL1Q6UXT8 129 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 OTOP2Q7RTS6 562 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 SPC24Q8NBT2 197 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 OR5B17Q8NGF7 314 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 PLEKHO2Q8TD55 490 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 HPDLQ96IR7 371 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
SHMT2-220ENST00000555634 OSBPL7Q9BZF2 842 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-220ENST00000555634 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 FBXL5Q9UKA1 691 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 AGAP1Q9UPQ3 857 aa12.04□□□□□ -0.48
SHMT2-220ENST00000555634 LUC7L2Q9Y383 392 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms