RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PRRX2Q99811 253 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 OXCT2Q9BYC2 517 aaPredicted RBP12.91□□□□□ -0.34
VRK1-204ENST00000555351 OLFML3Q9NRN5 406 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.91□□□□□ -0.34
VRK1-204ENST00000555351 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 ZFP37Q9Y6Q3 630 aaPredicted RBP12.91□□□□□ -0.34
VRK1-204ENST00000555351 VWA8A3KMH1 1905 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 H7C4K7 107 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
VRK1-204ENST00000555351 RFPL2O75678 378 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 RPL17P18621 184 aaKnown RBP12.9□□□□□ -0.34
VRK1-204ENST00000555351 LRPAP1P30533 357 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 PLA2G5P39877 138 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
VRK1-204ENST00000555351 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 ALCAMQ13740 583 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 MRPL58Q14197 206 aaKnown RBP12.9□□□□□ -0.34
VRK1-204ENST00000555351 ZNF720Q7Z2F6 126 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 FBXL6Q8N531 539 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 DDX12PQ92771 950 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 PBXIP1Q96AQ6 731 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 SUSD3Q96L08 255 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 STRA6Q9BX79 667 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 GOLGA2P5Q9HBQ8 144 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 EPS15L1Q9UBC2 864 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 UBQLN1Q9UMX0 589 aaKnown RBP12.9□□□□□ -0.34
VRK1-204ENST00000555351 DERAQ9Y315 318 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 TECTAO75443 2155 aa12.9□□□□□ -0.34
VRK1-204ENST00000555351 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 SPTLC2O15270 562 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 TBC1D4O60343 1298 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 XYLBO75191 536 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 PPP1R37O75864 691 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 CXCL8P10145 99 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
VRK1-204ENST00000555351 TKTP29401 623 aaKnown RBP12.89□□□□□ -0.35
VRK1-204ENST00000555351 OR1D2P34982 312 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 STAT6P42226 847 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 NUBP1P53384 320 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
VRK1-204ENST00000555351 POSTNQ15063 836 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 STK38Q15208 465 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 TPGS2Q68CL5 300 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 APPL2Q8NEU8 664 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 ZNF461Q8TAF7 563 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 ZHX3Q9H4I2 956 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 ASB7Q9H672 318 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
VRK1-204ENST00000555351 PIDD1Q9HB75 910 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
VRK1-204ENST00000555351 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
VRK1-204ENST00000555351 MYMKA6NI61 221 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 M0QZQ0 153 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 ABLIM3O94929 683 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 C8AP07357 584 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 ZSCAN22P10073 491 aaPredicted RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 BRCC3P46736 316 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 AARSP49588 968 aaKnown RBP eCLIP12.88□□□□□ -0.35
VRK1-204ENST00000555351 TDGQ13569 410 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 PPM1LQ5SGD2 360 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 GLYCTKQ8IVS8 523 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 SUGP1Q8IWZ8 645 aaKnown RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 C18orf25Q96B23 403 aaPredicted RBP12.88□□□□□ -0.35
VRK1-204ENST00000555351 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 EXOC7Q9UPT5 735 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 C2CD2Q9Y426 696 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 CDY1Q9Y6F8 540 aa12.88□□□□□ -0.35
VRK1-204ENST00000555351 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 ADAM12O43184 909 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 CUTAO60888 179 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 ATF2P15336 505 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 TNFSF9P41273 254 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 AMPD3Q01432 767 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms