RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CITO14578 2027 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 DYRK3O43781 588 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ATP5HO75947 161 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 SRP72O76094 671 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 EIF2S1P05198 315 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 MMP10P09238 476 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 NCAPHQ15003 741 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CINPQ9BW66 212 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 OSGEPL1Q9H4B0 414 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 MIIPQ5JXC2 388 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 HEATR4Q86WZ0 1026 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 RTKN2Q8IZC4 609 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF560Q96MR9 790 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 WWOXQ9NZC7 414 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CHUKO15111 745 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ENO3P13929 434 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ACTN3Q08043 901 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 MMGT1Q8N4V1 131 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ST13P5Q8NFI4 369 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 EPN3Q9H201 632 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 TMEM63CQ9P1W3 806 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 AIM2O14862 343 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CYP2D6P10635 497 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ARSEP51690 589 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 NME5P56597 212 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 EIF3EP60228 445 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CNTN1Q12860 1018 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 KCNB1Q14721 858 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 LRRC14Q15048 493 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CNDP1Q96KN2 507 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 POTEMA6NI47 508 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 ECE2O60344 883 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 HSMCR30P0CW71 290 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CAMK2GQ13555 558 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 COG2Q14746 738 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CYP51A1Q16850 503 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 HDHD2Q9H0R4 259 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
SYNE2-216ENST00000555002 TSC22D4Q9Y3Q8 395 aa7.22□□□□□ -1.25
SYNE2-216ENST00000555002 CHURC1-FNTBB4DL54 471 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 M0R3G1 203 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 FGFR4P22455 802 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 WEE1P30291 646 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.25
SYNE2-216ENST00000555002 EIF3BP55884 814 aaKnown RBP7.21□□□□□ -1.25
SYNE2-216ENST00000555002 PID1Q7Z2X4 250 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.21□□□□□ -1.25
SYNE2-216ENST00000555002 SNF8Q96H20 258 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 OLFM3Q96PB7 478 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 PRPF18Q99633 342 aaKnown RBP7.21□□□□□ -1.25
SYNE2-216ENST00000555002 THTPAQ9BU02 230 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 NDOR1Q9UHB4 597 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 SNX8Q9Y5X2 465 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 MYH11P35749 1972 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 KRT75O95678 551 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 DEFA1P59665 94 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 DEFA3P59666 94 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 MGAT5BQ3V5L5 792 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 TRIM65Q6PJ69 517 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 SYTL1Q8IYJ3 562 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 CAMKK1Q8N5S9 505 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 NMRK2Q9NPI5 230 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 ATP6V1HQ9UI12 483 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 ADAM21Q9UKJ8 722 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 A2MP01023 1474 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 C3orf70A6NLC5 250 aaPredicted RBP7.21□□□□□ -1.25
SYNE2-216ENST00000555002 PGM1P36871 562 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 VSNL1P62760 191 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 SNX17Q15036 470 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 TTC13Q8NBP0 860 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 HDAC6Q9UBN7 1215 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 DCDC2Q9UHG0 476 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 MTMR6Q9Y217 621 aa7.21□□□□□ -1.25
SYNE2-216ENST00000555002 TRAPPC3O43617 180 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 LRG1P02750 347 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 LRRC71Q8N4P6 559 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PTPRN2Q92932 1015 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 KIF2CQ99661 725 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 TRABDQ9H4I3 376 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SPACA6W5XKT8 324 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 CTTNBP2Q8WZ74 1663 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 UGGT2Q9NYU1 1516 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 A0A087X0T9 212 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NCF1BA6NI72 391 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NCF1CA8MVU1 366 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ERN1O75460 977 aaKnown RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POTEIP0CG38 1075 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NCF1P14598 390 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-216ENST00000555002 SERPINB1P30740 379 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 PLA2G4AP47712 749 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 ALDH1A3P47895 512 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POTEGQ6S5H5 508 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 POTEEQ6S8J3 1075 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 NANOGNBQ7Z5D8 188 aa7.21□□□□□ -1.26
SYNE2-216ENST00000555002 UNC45BQ8IWX7 931 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms