RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 PMS2P54278 862 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 PTENP60484 403 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 POLR2FP61218 127 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 ROR2Q01974 943 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 TTLL4Q14679 1199 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 LBRQ14739 615 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 DENND2CQ68D51 928 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 CWF19L1Q69YN2 538 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 CFAP61Q8NHU2 1237 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 KLHL29Q96CT2 875 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 HES6Q96HZ4 224 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 FAM210AQ96ND0 272 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.25□□□□□ -0.13
SIX1-203ENST00000554986 ADAM22Q9P0K1 906 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 TELO2Q9Y4R8 837 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 RGS16O15492 202 aaPredicted RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 TGFB3P10600 412 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 CCNB1P14635 433 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 PEX19P40855 299 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 PRKCIP41743 596 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 RPS6KA3P51812 740 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 MRPS35P82673 323 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 CCDC15Q0P6D6 951 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 DHX34Q14147 1143 aaKnown RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 ERICH1Q86X53 443 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 TRIM59Q8IWR1 403 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 ETNPPLQ8TBG4 499 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 SELENOSQ9BQE4 189 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
SIX1-203ENST00000554986 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
SIX1-203ENST00000554986 BLOC1S4Q9NUP1 217 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.25□□□□□ -0.13
SIX1-203ENST00000554986 ATP8A1Q9Y2Q0 1164 aa14.25□□□□□ -0.13
SIX1-203ENST00000554986 MYMKA6NI61 221 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 RAPGEF1Q13905 1077 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 CNGA2Q16280 664 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 LHX8Q68G74 356 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
SIX1-203ENST00000554986 HAS1Q92839 578 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 ZBTB10Q96DT7 871 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 CDHR1Q96JP9 859 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 NAP1L3Q99457 506 aaPredicted RBP14.24□□□□□ -0.13
SIX1-203ENST00000554986 NAP1L4Q99733 375 aaKnown RBP14.24□□□□□ -0.13
SIX1-203ENST00000554986 ERP44Q9BS26 406 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 ZNF577Q9BSK1 485 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 RNF208Q9H0X6 261 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 RXFP1Q9HBX9 757 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 LRRC4CQ9HCJ2 640 aa14.24□□□□□ -0.13
SIX1-203ENST00000554986 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 IPO5O00410 1097 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 MAFGO15525 162 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 DHX15O43143 795 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 GGPS1O95749 300 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 KRT16P08779 473 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ITGA4P13612 1032 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ATP4AP20648 1035 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 ARHGAP1Q07960 439 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 IRF2BP2Q7Z5L9 587 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 RAB3IPQ96QF0 476 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 PRMT1Q99873 361 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 OSBPL1AQ9BXW6 950 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 NAGPAQ9UK23 515 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ARL2BPQ9Y2Y0 163 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 GFPT2O94808 682 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 RTN3O95197 1032 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 SHBGP04278 402 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 GNAZP19086 355 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 PAPOLAP51003 745 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 GRB10Q13322 594 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 TAF11Q15544 211 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 PARP6Q2NL67 630 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 CELF3Q5SZQ8 465 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 TLK2Q86UE8 772 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 LARP4BQ92615 738 aaKnown RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ITFG2Q969R8 447 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 MTMR9Q96QG7 549 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 SENP7Q9BQF6 1050 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ROPN1BQ9BZX4 212 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 TRIM7Q9C029 511 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 ROPN1Q9HAT0 212 aaPredicted RBP14.23□□□□□ -0.13
SIX1-203ENST00000554986 PRKAG3Q9UGI9 489 aa14.23□□□□□ -0.13
SIX1-203ENST00000554986 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
SIX1-203ENST00000554986 DUSP11O75319 330 aaKnown RBP14.22□□□□□ -0.13
SIX1-203ENST00000554986 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
SIX1-203ENST00000554986 PGK1P00558 417 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms