RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PPP2R3AQ06190 1150 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 KCNC3Q14003 757 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 PRSS55Q6UWB4 352 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-214ENST00000554928 EFHBQ8N7U6 833 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 KLHL5Q96PQ7 755 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 PLEKHA5Q9HAU0 1116 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 MAPK8IP1Q9UQF2 711 aa13.43□□□□□ -0.26
SYNE2-214ENST00000554928 UBE4BO95155 1302 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 TMEM189-UBE2V1I3L0A0 370 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 ADAM12O43184 909 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 EXTL3O43909 919 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 MYL1P05976 194 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 EPCAMP16422 314 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 GLUD2P49448 558 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 CYP2J2P51589 502 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 DSG1Q02413 1049 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 DCLRE1AQ6PJP8 1040 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 GLYCTKQ8IVS8 523 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 RIN2Q8WYP3 895 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-214ENST00000554928 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 PDE11AQ9HCR9 933 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 SLC38A7Q9NVC3 462 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 IRAK3Q9Y616 596 aa13.42□□□□□ -0.26
SYNE2-214ENST00000554928 VCANP13611 3396 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 TEX28O15482 410 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 URODP06132 367 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 LRPAP1P30533 357 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 KCNB1Q14721 858 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 TMEM132DQ14C87 1099 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 KYAT1Q16773 422 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 KNOP1Q1ED39 458 aaKnown RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 RSPO2Q6UXX9 243 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 MSLNLQ96KJ4 702 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 TIGD1Q96MW7 591 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 UROC1Q96N76 676 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 ASB2Q96Q27 587 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 APOL5Q9BWW9 433 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 UBQLN1Q9UMX0 589 aaKnown RBP13.41□□□□□ -0.26
SYNE2-214ENST00000554928 COG5Q9UP83 839 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 PCDHA5Q9Y5H7 936 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 HCFC2Q9Y5Z7 792 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 A0A0C4DFX4 3053 aa13.41□□□□□ -0.26
SYNE2-214ENST00000554928 CITO14578 2027 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 SPTLC1O15269 473 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 IL9P15248 144 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 FGFR3P22607 806 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 NDUFV1P49821 464 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 PSMD2Q13200 908 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 ISM2Q6H9L7 571 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 C12orf76Q8N812 135 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 FBXL18Q96ME1 805 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 NECAB3Q96P71 396 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 ASB7Q9H672 318 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 RXFP1Q9HBX9 757 aa13.4□□□□□ -0.26
SYNE2-214ENST00000554928 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
SYNE2-214ENST00000554928 SPATA31D3P0C874 917 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 BMP1P13497 986 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CYP3A5P20815 502 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CASP4P49662 377 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 UBE2HP62256 183 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
SYNE2-214ENST00000554928 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 SPATA31D4Q6ZUB0 917 aa13.39□□□□□ -0.27
SYNE2-214ENST00000554928 CD302Q8IX05 232 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms