RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 BORCS6Q96GS4 357 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 NELL2Q99435 816 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 RAB34Q9BZG1 259 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 DNM3Q9UQ16 869 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 MIA3Q5JRA6 1907 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 FANCMQ8IYD8 2048 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 NOTCH4Q99466 2003 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 F5P12259 2224 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 H7C4K7 107 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 SPTLC1O15269 473 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 NCAM2O15394 837 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 HIP1RO75146 1068 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 ABLIM3O94929 683 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 MCF2P10911 925 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 CEBPBP17676 345 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 ARPP19P56211 112 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 NBR1Q14596 966 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 DRC1Q96MC2 740 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 CORO1BQ9BR76 489 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 TARS2Q9BW92 718 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 KMT5AQ9NQR1 393 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
RDH11-207ENST00000554731 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
RDH11-207ENST00000554731 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 E9PMD0 336 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 ATF2P15336 505 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 KCNE1P15382 129 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
RDH11-207ENST00000554731 PTGDRQ13258 359 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
RDH11-207ENST00000554731 KRT79Q5XKE5 535 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TANGO2Q6ICL3 276 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 ZNF852Q6ZMS4 543 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TAS1R3Q7RTX0 852 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 DGLUCYQ7Z3D6 616 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 DAW1Q8N136 415 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 DCLK2Q8N568 766 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 CLDN23Q96B33 292 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 ELSPBP1Q96BH3 223 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
RDH11-207ENST00000554731 PLA2G2FQ9BZM2 168 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 CYP4F11Q9HBI6 524 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 CNTN3Q9P232 1028 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 PCDHGA2Q9Y5H1 932 aa13.66□□□□□ -0.22
RDH11-207ENST00000554731 DCHS1Q96JQ0 3298 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ZNF197O14709 1029 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
RDH11-207ENST00000554731 PROZP22891 400 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 RPS9P46781 194 aaKnown RBP13.65□□□□□ -0.22
RDH11-207ENST00000554731 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
RDH11-207ENST00000554731 CTXN3Q4LDR2 81 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 PRSS36Q5K4E3 855 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 C18orf25Q96B23 403 aaPredicted RBP13.65□□□□□ -0.22
RDH11-207ENST00000554731 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
RDH11-207ENST00000554731 RUSC1Q9BVN2 902 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 C17orf75Q9HAS0 396 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ZFP14Q9HCL3 533 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 HEBP1Q9NRV9 189 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 NCDNQ9UBB6 729 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 FBXL5Q9UKA1 691 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 COL4A3Q01955 1670 aa13.65□□□□□ -0.22
RDH11-207ENST00000554731 LAD1O00515 517 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 ABLIM1O14639 778 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 SLC16A4O15374 487 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 MICAL2O94851 1124 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 SEC24AO95486 1093 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.233e-9■■■■□ 23.3
RDH11-207ENST00000554731 MCM4P33991 863 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 ADCY1Q08828 1119 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 STRN3Q13033 797 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 MAPK7Q13164 816 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms