RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PCDHB7Q9Y5E2 793 aa15.49■□□□□ 0.07
SHOX2-206ENST00000554685 DNAH12Q6ZR08 3092 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ABHD14A-ACY1A0A1B0GW23 586 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 INPPL1O15357 1258 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 MEFVO15553 781 aaPredicted RBP15.48■□□□□ 0.07
SHOX2-206ENST00000554685 CLSTN1O94985 981 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 GYPCP04921 128 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 THP07101 528 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 UCHL3P15374 230 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ATICP31939 592 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 KLK7P49862 253 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 RBP5P82980 135 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ZBED6P86452 979 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 PPIGQ13427 754 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ZBTB6Q15916 424 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 PTPN21Q16825 1174 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ENOSF1Q7L5Y1 443 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
SHOX2-206ENST00000554685 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 URGCPQ8TCY9 931 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 FAXDC2Q96IV6 333 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 TTYH3Q9C0H2 523 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 GANQ9H2C0 597 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 DPP3Q9NY33 737 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 KANSL3Q9P2N6 904 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 MYO6Q9UM54 1294 aa15.48■□□□□ 0.07
SHOX2-206ENST00000554685 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 MFAP3LO75121 409 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 BAIAP3O94812 1187 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 VNN1O95497 513 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 KRT19P08727 400 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 P4HA1P13674 534 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 TBXAS1P24557 533 aaPredicted RBP15.47■□□□□ 0.07
SHOX2-206ENST00000554685 CASP14P31944 242 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 MLH1P40692 756 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 PNPLA4P41247 253 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 MFAP3P55082 362 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 POLR2FP61218 127 aaKnown RBP15.47■□□□□ 0.07
SHOX2-206ENST00000554685 GRIK3Q13003 919 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
SHOX2-206ENST00000554685 CCDC186Q7Z3E2 898 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 C7orf61Q8IZ16 206 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 C1orf127Q8N9H9 656 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 CPLX3Q8WVH0 158 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 SEMA4DQ92854 862 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 LPPQ93052 612 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 ZNF560Q96MR9 790 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 SPAG5Q96R06 1193 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 GAD1Q99259 594 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 SIX2Q9NPC8 291 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 IL23AQ9NPF7 189 aa15.47■□□□□ 0.07
SHOX2-206ENST00000554685 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
SHOX2-206ENST00000554685 PTGESO14684 152 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 EVI5O60447 810 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 NOL4O94818 638 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 STAU1O95793 577 aaKnown RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 ITGB3P05106 788 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 CSF2RAP15509 400 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 IBSPP21815 317 aaPredicted RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 LRPAP1P30533 357 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 KRT9P35527 623 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 NOP14P78316 857 aaKnown RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 GCNT1Q02742 428 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 MYO1EQ12965 1108 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 ZNF699Q32M78 642 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 GLRA4Q5JXX5 417 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 PPM1KQ8N3J5 372 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 LRRC52Q8N7C0 313 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 JAKMIP2Q96AA8 810 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 ZFP42Q96MM3 310 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.07
SHOX2-206ENST00000554685 PANX2Q96RD6 677 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 VRTNQ9H8Y1 702 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 DNAJC12Q9UKB3 198 aa15.46■□□□□ 0.07
SHOX2-206ENST00000554685 CITO14578 2027 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 CCDC85CA6NKD9 419 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 OFD1O75665 1012 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 ASS1P00966 412 aaKnown RBP15.45■□□□□ 0.06
SHOX2-206ENST00000554685 AMHP03971 560 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 CCDC172P0C7W6 258 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 PAX3P23760 479 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 POLR2BP30876 1174 aaKnown RBP15.45■□□□□ 0.06
SHOX2-206ENST00000554685 FXR1P51114 621 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHOX2-206ENST00000554685 SCNN1GP51170 649 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 MYL6P60660 151 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
SHOX2-206ENST00000554685 FPGSQ05932 587 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 OR8K1Q8NGG5 319 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 UROC1Q96N76 676 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 MRPL9Q9BYD2 267 aaKnown RBP15.45■□□□□ 0.06
SHOX2-206ENST00000554685 STK33Q9BYT3 514 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 UBE2TQ9NPD8 197 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms