RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MIPEPQ99797 713 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 RNF41Q9H4P4 317 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-229ENST00000554672 JMJD4Q9H9V9 463 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 PUF60Q9UHX1 559 aaKnown RBP5.56□□□□□ -1.52
ATXN3-229ENST00000554672 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 AK5Q9Y6K8 562 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-229ENST00000554672 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
ATXN3-229ENST00000554672 CCDC171Q6TFL3 1326 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 KRT37O76014 449 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 FGF18O76093 207 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CST3P01034 146 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 EIF4BP23588 611 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CD52P31358 61 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ETF1P62495 437 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 FGD1P98174 961 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 RBM10P98175 930 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ITIH3Q06033 890 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 TRAF1Q13077 416 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 KCNC3Q14003 757 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 PAN2Q504Q3 1202 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 SPOUT1Q5T280 376 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 SFRP5Q5T4F7 317 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 PRAMEF13Q5VWM6 474 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CES5AQ6NT32 575 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 LETMD1Q6P1Q0 360 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 AGMOQ6ZNB7 445 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ZSWIM9Q86XI8 627 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 HID1Q8IV36 788 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 MFSD2AQ8NA29 543 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ESR2Q92731 530 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CASP10Q92851 521 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 SENP7Q9BQF6 1050 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 TRAIPQ9BWF2 469 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 ADAM7Q9H2U9 754 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 KAT14Q9H8E8 782 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 AGO3Q9H9G7 860 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CARS2Q9HA77 564 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
ATXN3-229ENST00000554672 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 LZTS1Q9Y250 596 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 PCDHA1Q9Y5I3 950 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 CAPN6Q9Y6Q1 641 aa5.55□□□□□ -1.52
ATXN3-229ENST00000554672 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 CACNA1AO00555 2505 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 BAZ2AQ9UIF9 1905 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MBLAC1A4D2B0 266 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 RRN3P2A6NIE6 340 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 C2CD4DB7Z1M9 353 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 ZBTB5O15062 677 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 FIBPO43427 364 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 PRPF40AO75400 957 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 SCG2P13521 617 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 AOC1P19801 751 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MTHFRP42898 656 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MRPS6P82932 125 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 PPFIA1Q13136 1202 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 ANGPT1Q15389 498 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MCMDC2Q4G0Z9 681 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MEI1Q5TIA1 1274 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 IQCA1Q86XH1 822 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 THNSL1Q8IYQ7 743 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 NME8Q8N427 588 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MFSD4AQ8N468 514 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 IL31RAQ8NI17 732 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 LINC01599Q8WXQ3 324 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 LIN37Q96GY3 246 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 DUSP9Q99956 384 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 APOL5Q9BWW9 433 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 ERAP1Q9NZ08 941 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 TPX2Q9ULW0 747 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 PADI3Q9ULW8 664 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 SUPT16HQ9Y5B9 1047 aaKnown RBP5.54□□□□□ -1.52
ATXN3-229ENST00000554672 MYO7AQ13402 2215 aa5.54□□□□□ -1.52
ATXN3-229ENST00000554672 SIP14410 1827 aa5.53□□□□□ -1.52
ATXN3-229ENST00000554672 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms