RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ROBO3Q96MS0 1386 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 KRIT1O00522 736 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 DDX3XO00571 662 aaKnown RBP eCLIP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 ERC2O15083 957 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 RNF113AO15541 343 aaKnown RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 GPAA1O43292 621 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 TADA3O75528 432 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 GLRX3O76003 335 aaKnown RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 GNAT1P11488 350 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 AKR1B1P15121 316 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 VCAM1P19320 739 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 MX1P20591 662 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 HOXD10P28358 340 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 CNR2P34972 360 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 GCLCP48506 637 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 FLT3LGP49771 235 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 HERVK_113P62684 666 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 IRX3P78415 501 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 PABPC4Q13310 644 aaKnown RBP eCLIP4.95□□□□□ -1.621e-6■■■□□ 16
VTI1B-203ENST00000554636 SEPT2Q15019 361 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 KIZQ2M2Z5 673 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 CERKLQ49MI3 558 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 SLC9C1Q4G0N8 1177 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 EMC4Q5J8M3 183 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 UBXN11Q5T124 520 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 C12orf60Q5U649 245 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 ZSCAN25Q6NSZ9 544 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 TEPPQ6URK8 271 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 LBX2Q6XYB7 198 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 C16orf86Q6ZW13 317 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 GCC1Q96CN9 775 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 STRBPQ96SI9 672 aaKnown RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 P2RX7Q99572 595 aaKnown RBP4.95□□□□□ -1.62
VTI1B-203ENST00000554636 FEZ1Q99689 392 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 KIAA1683Q9H0B3 1180 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 TXNRD2Q9NNW7 524 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 ATP8A2Q9NTI2 1148 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 CROTQ9UKG9 612 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 MSRB2Q9Y3D2 182 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 SLC4A4Q9Y6R1 1079 aa4.95□□□□□ -1.62
VTI1B-203ENST00000554636 A0A1W2PRG0 241 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 GSG1L2A8MUP6 293 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 TNPO2O14787 897 aaKnown RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 NKRFO15226 690 aaKnown RBP eCLIP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 FOXP2O15409 715 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 NOBOXO60393 691 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 CNMDO75829 334 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 LRG1P02750 347 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SOD2P04179 222 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ZFYP08048 801 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 CELA3BP08861 270 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 EN2P19622 333 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 USP14P54578 494 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 GPR85P60893 370 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ICA1Q05084 483 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ADAM9Q13443 819 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SKOR2Q2VWA4 1001 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SBK1Q52WX2 424 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 FAM209AQ5JX71 171 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 KIAA1755Q5JYT7 1200 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ANKRD45Q5TZF3 282 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 GIMAP6Q6P9H5 292 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 CTR9Q6PD62 1173 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 RSPO2Q6UXX9 243 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 CATSPERGQ6ZRH7 1159 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 TMEM179Q6ZVK1 233 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 OTOP3Q7RTS5 596 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 MTDHQ86UE4 582 aaKnown RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SMC5Q8IY18 1101 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 IFNL3Q8IZI9 196 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 EXOC6Q8TAG9 804 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 RAET1EQ8TD07 263 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SEC62Q99442 399 aaKnown RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SMOC1Q9H4F8 434 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 IPPKQ9H8X2 491 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 CABP5Q9NP86 173 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 SLC6A20Q9NP91 592 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ARPP21Q9UBL0 812 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ASH2LQ9UBL3 628 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 STAP2Q9UGK3 403 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 GJD2Q9UKL4 321 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 ZNF236Q9UL36 1845 aa4.94□□□□□ -1.62
VTI1B-203ENST00000554636 IGKV6D-41A0A0C4DH26 115 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 MPHOSPH10O00566 681 aaKnown RBP4.93□□□□□ -1.62
VTI1B-203ENST00000554636 ADCY3O60266 1144 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 MAFKO60675 156 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 IGHDP01880 384 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 CCL5P13501 91 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 RPL13P26373 211 aaKnown RBP4.93□□□□□ -1.62
VTI1B-203ENST00000554636 PDE1AP54750 535 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 PLP2Q04941 152 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 SPIRE1Q08AE8 756 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 TUSC3Q13454 348 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 FOXB2Q5VYV0 432 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 ERICH6BQ5W0A0 696 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 CCDC129Q6ZRS4 1044 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 GPRC5AQ8NFJ5 357 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 CXorf38Q8TB03 319 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 SOCS4Q8WXH5 440 aa4.93□□□□□ -1.62
VTI1B-203ENST00000554636 COA7Q96BR5 231 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms