RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 CD302Q8IX05 232 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 UBALD2Q8IYN6 164 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 LINC00301Q8NCQ3 95 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SMG7Q92540 1137 aaKnown RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 DDX12PQ92771 950 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 STAMQ92783 540 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 DNAJC19Q96DA6 116 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 LRRC27Q9C0I9 530 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 HAPLN2Q9GZV7 340 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 RPF1Q9H9Y2 349 aaKnown RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 WDR6Q9NNW5 1121 aaKnown RBP9.51□□□□□ -0.89
ACTN1-213ENST00000554508 MTRRQ9UBK8 725 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 FBXW11Q9UKB1 542 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 SORCS3Q9UPU3 1222 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 TRIOO75962 3097 aa9.51□□□□□ -0.89
ACTN1-213ENST00000554508 TCHHQ07283 1943 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 A0A0B4J269 797 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 MYMKA6NI61 221 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 H7C4K7 107 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 MEFVO15553 781 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 YEATS4O95619 227 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 ZSCAN22P10073 491 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 CXCL8P10145 99 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 HOXA9P31269 272 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 OR1D2P34982 312 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 BRCC3P46736 316 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 POU5F1Q01860 360 aaKnown RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 POSTNQ15063 836 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 ZBTB6Q15916 424 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 C3orf58Q8NDZ4 430 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 APPL2Q8NEU8 664 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 MSTO1Q9BUK6 570 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 KCNH6Q9H252 994 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.891e-7■■■■■ 37
ACTN1-213ENST00000554508 TFIP11Q9UBB9 837 aaKnown RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 UBQLN1Q9UMX0 589 aaKnown RBP9.5□□□□□ -0.89
ACTN1-213ENST00000554508 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 STYXL1Q9Y6J8 313 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 CLUHO75153 1309 aa9.5□□□□□ -0.89
ACTN1-213ENST00000554508 SCN1AP35498 2009 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 NOTCH4Q99466 2003 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ZDBF2Q9HCK1 2354 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 LACTBL1A8MY62 500 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ANKRD63C9JTQ0 380 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 FAM189A1O60320 539 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 CUTAO60888 179 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 XYLBO75191 536 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 F13A1P00488 732 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 POU2F2P09086 479 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 MYBP10242 640 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 PAX3P23760 479 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 LRPAP1P30533 357 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 GBP2P32456 591 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 TNFSF9P41273 254 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 AMPD3Q01432 767 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ALCAMQ13740 583 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 MRPL58Q14197 206 aaKnown RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ENOX2Q16206 610 aaKnown RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ZC2HC1CQ53FD0 456 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 AXDND1Q5T1B0 1012 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ADALQ6DHV7 355 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 SLC8B1Q6J4K2 584 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 SLC39A4Q6P5W5 647 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 HFE2Q6ZVN8 426 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 SFR1Q86XK3 245 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 STRA6Q9BX79 667 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 OXCT2Q9BYC2 517 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 PANK2Q9BZ23 570 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 CUEDC2Q9H467 287 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 MRPL44Q9H9J2 332 aaKnown RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 OLFML3Q9NRN5 406 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 IGSF9Q9P2J2 1179 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 RAPGEFL1Q9UHV5 662 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 CPSF3Q9UKF6 684 aaKnown RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 DERAQ9Y315 318 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 CDY1Q9Y6F8 540 aa9.49□□□□□ -0.89
ACTN1-213ENST00000554508 ZFP37Q9Y6Q3 630 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-213ENST00000554508 A0A087X0B3 334 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms