RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 C8AP07357 584 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 ADRB2P07550 413 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 PLCG1P19174 1290 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-221ENST00000554453 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
ABCD4-221ENST00000554453 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
ABCD4-221ENST00000554453 KYAT1Q16773 422 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-221ENST00000554453 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 RAD54LQ92698 747 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-221ENST00000554453 SUSD3Q96L08 255 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 PARVGQ9HBI0 331 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 CLIC4Q9Y696 253 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 H7C4K7 107 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 I3L4J1 428 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 FAM13AO94988 1023 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 HARSP12081 509 aaKnown RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 NPR3P17342 541 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 CYP3A5P20815 502 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 SYT1P21579 422 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 FSHRP23945 695 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 LRPAP1P30533 357 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 ABCD1P33897 745 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 MRE11P49959 708 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 GTF2BQ00403 316 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 SEZ6Q53EL9 994 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 USP49Q70CQ1 688 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 LARP4BQ92615 738 aaKnown RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 DNMT3BQ9UBC3 853 aaKnown RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
ABCD4-221ENST00000554453 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.13□□□□□ -0.47
ABCD4-221ENST00000554453 A0A0B4J269 797 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
ABCD4-221ENST00000554453 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 OGTO15294 1046 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 CCL16O15467 120 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
ABCD4-221ENST00000554453 ATF2P15336 505 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 MARCKSP29966 332 aaPredicted RBP12.12□□□□□ -0.47
ABCD4-221ENST00000554453 MATR3P43243 847 aaKnown RBP eCLIP12.12□□□□□ -0.472e-10■■□□□ 11.7
ABCD4-221ENST00000554453 LIG4P49917 911 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 NTHL1P78549 312 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 RESTQ13127 1097 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 TMEM105Q8N8V8 129 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 BICD1Q96G01 975 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 MFSD1Q9H3U5 465 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 ST6GALNAC4Q9H4F1 302 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
ABCD4-221ENST00000554453 KMT2EQ8IZD2 1858 aa12.12□□□□□ -0.47
ABCD4-221ENST00000554453 PDCD11Q14690 1871 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 M0QZQ0 153 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 PI15O43692 258 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 NARSO43776 548 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 FAM189A1O60320 539 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 KRT18P05783 430 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 CXCL8P10145 99 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 SRFP11831 508 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 NMT1P30419 496 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 ELF1P32519 619 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 TNFSF9P41273 254 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 ROR1Q01973 937 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 HTR4Q13639 388 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 SLC39A14Q15043 492 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 TPGS2Q68CL5 300 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 GET4Q7L5D6 327 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 CD302Q8IX05 232 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 DDX12PQ92771 950 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 FGF13Q92913 245 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 RTP3Q9BQQ7 232 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 RPP25Q9BUL9 199 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 ZSCAN16Q9H4T2 348 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-221ENST00000554453 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
ABCD4-221ENST00000554453 FBXO2Q9UK22 296 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms