RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 NOMO2Q5JPE7 1267 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 TDRD10Q5VZ19 366 aaKnown RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 RTN4RL1Q86UN2 441 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 LRRC43Q8N309 656 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 LRRC52Q8N7C0 313 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 NT5C1BQ96P26 610 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 PPP1R10Q96QC0 940 aaKnown RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 GAD1Q99259 594 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 INTS2Q9H0H0 1204 aaKnown RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 FAM124BQ9H5Z6 455 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-210ENST00000553950 RAB20Q9NX57 234 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 KLK14Q9P0G3 267 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 FBXL5Q9UKA1 691 aa15.64■□□□□ 0.09
SHMT2-210ENST00000553950 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 ARHGEF37A1IGU5 675 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 TEX33O43247 280 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 AP5Z1O43299 807 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 HLA-DRAP01903 254 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 LRPAP1P30533 357 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 WNT7BP56706 349 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 WDR5P61964 334 aaKnown RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 RBP5P82980 135 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 MYO1EQ12965 1108 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 ZBTB6Q15916 424 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 GLRA4Q5JXX5 417 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 LMBRD2Q68DH5 695 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 TRIM65Q6PJ69 517 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 ENOSF1Q7L5Y1 443 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 PPFIBP1Q86W92 1011 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 OR5B17Q8NGF7 314 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 LPPQ93052 612 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 DDX27Q96GQ7 796 aaKnown RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 SLC9A7Q96T83 725 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 POP1Q99575 1024 aaKnown RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 LSM14BQ9BX40 385 aaKnown RBP15.63■□□□□ 0.09
SHMT2-210ENST00000553950 EDEM3Q9BZQ6 932 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 DPP3Q9NY33 737 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 APEX2Q9UBZ4 518 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 INPP5FQ9Y2H2 1132 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 SIK3Q9Y2K2 1263 aa15.63■□□□□ 0.09
SHMT2-210ENST00000553950 A0A1W2PQJ5 194 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 PTGESO14684 152 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 MEFVO15553 781 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 OFD1O75665 1012 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 ITGB3P05106 788 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 KRT19P08727 400 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 IBSPP21815 317 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 SCNN1GP51170 649 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 GSDMDP57764 484 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 RNASELQ05823 741 aaKnown RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 TUSC3Q13454 348 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 SGSM1Q2NKQ1 1148 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 ZNF699Q32M78 642 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 TMC6Q7Z403 805 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 ZNF397Q8NF99 534 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 HELQQ8TDG4 1101 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 TAS1R2Q8TE23 839 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 ZFP42Q96MM3 310 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 FAM193BQ96PV7 902 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 NUCKS1Q9H1E3 243 aaKnown RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 VRTNQ9H8Y1 702 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 CEP72Q9P209 647 aa15.62■□□□□ 0.09
SHMT2-210ENST00000553950 ZMYND8Q9ULU4 1186 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-210ENST00000553950 SCN1AP35498 2009 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 ZBBXA8MT70 800 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 ASS1P00966 412 aaKnown RBP15.61■□□□□ 0.09
SHMT2-210ENST00000553950 SYN1P17600 705 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 PON1P27169 355 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 POLR2BP30876 1174 aaKnown RBP15.61■□□□□ 0.09
SHMT2-210ENST00000553950 YWHAEP62258 255 aaKnown RBP15.61■□□□□ 0.09
SHMT2-210ENST00000553950 NOP14P78316 857 aaKnown RBP15.61■□□□□ 0.09
SHMT2-210ENST00000553950 SV2CQ496J9 727 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 CACNA2D4Q7Z3S7 1137 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 CNGA4Q8IV77 575 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 TTC39CQ8N584 583 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 EHBP1Q8NDI1 1231 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 HERVK_113Q902F9 699 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 ZNF516Q92618 1163 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 TOP1MTQ969P6 601 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 JAKMIP2Q96AA8 810 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 ZMAT2Q96NC0 199 aaKnown RBP15.61■□□□□ 0.09
SHMT2-210ENST00000553950 CRACR2AQ9BSW2 395 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 TUBGCP4Q9UGJ1 667 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 MYO6Q9UM54 1294 aa15.61■□□□□ 0.09
SHMT2-210ENST00000553950 KIAA1671Q9BY89 1806 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 MEIS3P2A8K0S8 358 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 ACRP10323 421 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 FGFR1P11362 822 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 TAF6P49848 677 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 TNNC1P63316 161 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 GCNT1Q02742 428 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 TCTN1Q2MV58 587 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 ZNF667Q5HYK9 610 aa15.6■□□□□ 0.09
SHMT2-210ENST00000553950 TMEM240Q5SV17 173 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms