RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 LDAHQ9H6V9 325 aa4.38□□□□□ -1.71
VRK1-202ENST00000553683 USP15Q9Y4E8 981 aaPredicted RBP4.38□□□□□ -1.71
VRK1-202ENST00000553683 A0A1B0GTW7 788 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 CCDC154A6NI56 674 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 ZNF185O15231 689 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 FOXN1O15353 648 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 B3GALT2O43825 422 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 NCR1O76036 304 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 HAUS5O94927 633 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
VRK1-202ENST00000553683 TGM1P22735 817 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 DDX6P26196 483 aaKnown RBP eCLIP4.37□□□□□ -1.71
VRK1-202ENST00000553683 HMGA2P52926 109 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 RAP2BP61225 183 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 FAM189BP81408 668 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 KLF10Q13118 480 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 ODF1Q14990 250 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 MRGPRGQ86SM5 289 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 LDLRAD3Q86YD5 345 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 MAPKAPK5Q8IW41 473 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 TMEM132CQ8N3T6 1108 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
VRK1-202ENST00000553683 PNKPQ96T60 521 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 NEU1Q99519 415 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 ZNF768Q9H5H4 540 aaKnown RBP4.37□□□□□ -1.71
VRK1-202ENST00000553683 RLIMQ9NVW2 624 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 DDX56Q9NY93 547 aaKnown RBP4.37□□□□□ -1.71
VRK1-202ENST00000553683 JKAMPQ9P055 326 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 KCNE5Q9UJ90 142 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 NEU2Q9Y3R4 380 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 PCDHB1Q9Y5F3 818 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 COL4A3Q01955 1670 aa4.37□□□□□ -1.71
VRK1-202ENST00000553683 CENPVL1A0A0U1RR11 272 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 PIPSLA2A3N6 862 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 SLC43A1O75387 559 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 PDGFRBP09619 1106 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 CYP2C19P33261 490 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 AVPR1BP47901 424 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 GUCY1B3Q02153 619 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 TLE1Q04724 770 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 TSHZ3Q63HK5 1081 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 Q6ZPA2 131 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 PDSS2Q86YH6 399 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 AOPEPQ8N6M6 819 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 SLC9A6Q92581 669 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 TMX3Q96JJ7 454 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 FAM167AQ96KS9 214 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 DMRTA2Q96SC8 542 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 TOR3AQ9H497 397 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 SERHL2Q9H4I8 314 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 GNL3LQ9NVN8 582 aaKnown RBP4.36□□□□□ -1.71
VRK1-202ENST00000553683 FBXO34Q9NWN3 711 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 RNF181Q9P0P0 153 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 ANKRD6Q9Y2G4 727 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 PCDHA13Q9Y5I0 950 aa4.36□□□□□ -1.71
VRK1-202ENST00000553683 ERN1O75460 977 aaKnown RBP4.35□□□□□ -1.71
VRK1-202ENST00000553683 CDKL5O76039 1030 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 NDUFA10O95299 355 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 FOSP01100 380 aaPredicted RBP4.35□□□□□ -1.71
VRK1-202ENST00000553683 POU2F2P09086 479 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 KRT4P19013 534 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 PDCP20941 246 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 DSC2Q02487 901 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 UAP1L1Q3KQV9 507 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 C3orf36Q3SXR2 165 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 LAIR1Q6GTX8 287 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 FOXR2Q6PJQ5 311 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 GADL1Q6ZQY3 521 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 USP45Q70EL2 814 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 C3orf20Q8ND61 904 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 CPEB3Q8NE35 698 aaKnown RBP4.35□□□□□ -1.71
VRK1-202ENST00000553683 FBXO18Q8NFZ0 1043 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 HSPBAP1Q96EW2 488 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 MYOCQ99972 504 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 GALNT9Q9HCQ5 603 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 SERPINB13Q9UIV8 391 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 PACSIN3Q9UKS6 424 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 PNMA8BQ9ULN7 279 aaPredicted RBP4.35□□□□□ -1.71
VRK1-202ENST00000553683 LUC7L2Q9Y383 392 aaKnown RBP4.35□□□□□ -1.71
VRK1-202ENST00000553683 NOX1Q9Y5S8 564 aa4.35□□□□□ -1.71
VRK1-202ENST00000553683 A0A087X1B8 175 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 GRM6O15303 877 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 RAMP2O60895 175 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 ALDH1L1O75891 902 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 ABLIM3O94929 683 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 GCP02774 474 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 ELANEP08246 267 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.71
VRK1-202ENST00000553683 ZEB1P37275 1124 aaPredicted RBP4.34□□□□□ -1.71
VRK1-202ENST00000553683 IL12RB1P42701 662 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 PTTG1IPP53801 180 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 EPHB1P54762 984 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 OCA2Q04671 838 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 RESTQ13127 1097 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 IL10RAQ13651 578 aa4.34□□□□□ -1.71
VRK1-202ENST00000553683 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms