RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 CWF19L1Q69YN2 538 aaKnown RBP17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ELMSAN1Q6PJG2 1045 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ASCL5Q7RTU5 278 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 FILIP1Q7Z7B0 1213 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-209ENST00000553659 VSTM4Q8IW00 320 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 TPH2Q8IWU9 490 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ADSSL1Q8N142 457 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 FLCNQ8NFG4 579 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 SNX27Q96L92 541 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 ZNF830Q96NB3 372 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-209ENST00000553659 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 MIOSQ9NXC5 875 aa17.47■□□□□ 0.39
ACTN1-209ENST00000553659 GLUD1P00367 558 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 AOC1P19801 751 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 MLH1P40692 756 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 DSG1Q02413 1049 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 KLHL10Q6JEL2 608 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 NELFBQ8WX92 580 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 STAMQ92783 540 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 CPB2Q96IY4 423 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 PNMA5Q96PV4 448 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 COLEC11Q9BWP8 271 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 WDR6Q9NNW5 1121 aaKnown RBP17.46■□□□□ 0.39
ACTN1-209ENST00000553659 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 HES2Q9Y543 173 aa17.46■□□□□ 0.39
ACTN1-209ENST00000553659 ZFHX2Q9C0A1 2572 aaPredicted RBP17.46■□□□□ 0.39
ACTN1-209ENST00000553659 DOCK6Q96HP0 2047 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 PRR23AA6NEV1 266 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CCP110O43303 1012 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 PI15O43692 258 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 N4BP1O75113 896 aaKnown RBP17.45■□□□□ 0.38
ACTN1-209ENST00000553659 C1RP00736 705 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CASP1P29466 404 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CCT6AP40227 531 aaKnown RBP17.45■□□□□ 0.38
ACTN1-209ENST00000553659 TERF1P54274 439 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 FOXR2Q6PJQ5 311 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 FAM114A1Q8IWE2 563 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 HDAC7Q8WUI4 952 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
ACTN1-209ENST00000553659 ZFP42Q96MM3 310 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 HSD17B14Q9BPX1 270 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
ACTN1-209ENST00000553659 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 CHST7Q9NS84 486 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 ANKEF1Q9NU02 776 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 FBXL21Q9UKT6 434 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 GIT1Q9Y2X7 761 aa17.45■□□□□ 0.38
ACTN1-209ENST00000553659 POTEMA6NI47 508 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 DGAT1O75907 488 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 KIF20AO95235 890 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 LYPLA2O95372 231 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 PAPLNO95428 1278 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 ARF4P18085 180 aaPredicted RBP17.44■□□□□ 0.38
ACTN1-209ENST00000553659 MUTP22033 750 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 GBP2P32456 591 aaPredicted RBP17.44■□□□□ 0.38
ACTN1-209ENST00000553659 ARL2P36404 184 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 SCNN1GP51170 649 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 MBTD1Q05BQ5 628 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 GPR65Q8IYL9 337 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 HACE1Q8IYU2 909 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 SIX5Q8N196 739 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 APOL6Q9BWW8 343 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 TRIM6Q9C030 488 aaPredicted RBP17.44■□□□□ 0.38
ACTN1-209ENST00000553659 THAP9Q9H5L6 903 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 KCND1Q9NSA2 647 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 BLOC1S4Q9NUP1 217 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 WNT16Q9UBV4 365 aa17.44■□□□□ 0.38
ACTN1-209ENST00000553659 LIMA1Q9UHB6 759 aaKnown RBP17.44■□□□□ 0.38
ACTN1-209ENST00000553659 LRRC10BA6NIK2 292 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 F8W810 466 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 RFPL2O75678 378 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
ACTN1-209ENST00000553659 TPM2P07951 284 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 EEF1GP26641 437 aaKnown RBP17.43■□□□□ 0.38
ACTN1-209ENST00000553659 CAPSQ13938 189 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 AMHR2Q16671 573 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 FRMD5Q7Z6J6 570 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 CCDC105Q8IYK2 499 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 GSTCDQ8NEC7 633 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 ASAP3Q8TDY4 903 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 SMG7Q92540 1137 aaKnown RBP17.43■□□□□ 0.38
ACTN1-209ENST00000553659 NKD2Q969F2 451 aaPredicted RBP17.43■□□□□ 0.38
ACTN1-209ENST00000553659 NXPE3Q969Y0 559 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 PLIN2Q99541 437 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 PLEKHA4Q9H4M7 779 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.43■□□□□ 0.38
ACTN1-209ENST00000553659 EPS15L1Q9UBC2 864 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 CLUHO75153 1309 aa17.43■□□□□ 0.38
ACTN1-209ENST00000553659 FAM186AA6NE01 2351 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms