RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 HDCP19113 662 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 FGFR2P21802 821 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 IL13P35225 146 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 EPHB3P54753 998 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 GP2P55259 537 aaKnown RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 RPS16P62249 146 aaKnown RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 GALNT1Q10472 559 aaPredicted RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 STARD3Q14849 445 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 ARL13BQ3SXY8 428 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 CCDC38Q502W7 563 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 C3orf38Q5JPI3 329 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 PGBD2Q6P3X8 592 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 MICU3Q86XE3 530 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 REXO1L1PQ8IX06 675 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 RTKN2Q8IZC4 609 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 CACNA2D3Q8IZS8 1091 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 FBXO18Q8NFZ0 1043 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 LPPQ93052 612 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 SLC7A6OSQ96CW6 309 aaPredicted RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 AJUBAQ96IF1 538 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 ENKD1Q9H0I2 346 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 MYLK2Q9H1R3 596 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 GCM1Q9NP62 436 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
TDP1-207ENST00000553617 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
TDP1-207ENST00000553617 FFAR2O15552 330 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 TEX33O43247 280 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 SEMA7AO75326 666 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 TOX4O94842 621 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 ABHD16AO95870 558 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 SBK3P0C264 359 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 HSD3B1P14060 373 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 TAL1P17542 331 aaPredicted RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 EEF1GP26641 437 aaKnown RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 ALDH1A3P47895 512 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 LIMS1P48059 325 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 ALDH9A1P49189 494 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 MRE11P49959 708 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 DUSP2Q05923 314 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 EXOSC9Q06265 439 aaKnown RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 DLX2Q07687 328 aaPredicted RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 OTUD7BQ6GQQ9 843 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 CCDC70Q6NSX1 233 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 LVRNQ6Q4G3 990 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 CLEC4GQ6UXB4 293 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 ZDHHC14Q8IZN3 488 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 ZNF527Q8NB42 609 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 FANCBQ8NB91 859 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 OR6B3Q8NGW1 331 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 STON2Q8WXE9 905 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 GCC1Q96CN9 775 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 PPP1R16BQ96T49 567 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 GDF15Q99988 308 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 TMEM120AQ9BXJ8 343 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 C11orf54Q9H0W9 315 aaPredicted RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 KCNH6Q9H252 994 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 SACM1LQ9NTJ5 587 aa4.65□□□□□ -1.67
TDP1-207ENST00000553617 SPATA6Q9NWH7 488 aaPredicted RBP4.65□□□□□ -1.67
TDP1-207ENST00000553617 GOLGA6L3A6NEY3 463 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 CLCA1A8K7I4 914 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 HMGB1P1B2RPK0 211 aaPredicted RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 M0R3H8 397 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 BTN3A1O00481 513 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 BIN1O00499 593 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 GRM6O15303 877 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 SKAP2O75563 359 aaPredicted RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 ANXA2P07355 339 aaKnown RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 VSIG10L2P0DP72 767 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 IL1R1P14778 569 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 PTMSP20962 102 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 RPL13P26373 211 aaKnown RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 PTPN7P35236 360 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 MEOX1P50221 254 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 KIF22Q14807 665 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 PABPC1LQ4VXU2 614 aaKnown RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 CCDC93Q567U6 631 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 MFSD14BQ5SR56 506 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 AGBL4Q5VU57 503 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 CATSPERGQ6ZRH7 1159 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 Q6ZUG5 572 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 PDZD4Q76G19 769 aaPredicted RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 FRMD5Q7Z6J6 570 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 PAF1Q8N7H5 531 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 IL17RDQ8NFM7 739 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 IL17REQ8NFR9 667 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 CYP2W1Q8TAV3 490 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 MDM1Q8TC05 714 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 C18orf8Q96DM3 657 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 CEP95Q96GE4 821 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 SNX22Q96L94 193 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 YTHDC1Q96MU7 727 aaKnown RBP4.64□□□□□ -1.67
TDP1-207ENST00000553617 SENP7Q9BQF6 1050 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 KIAA1683Q9H0B3 1180 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 SERHLQ9NQF3 203 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 GJB4Q9NTQ9 266 aa4.64□□□□□ -1.67
TDP1-207ENST00000553617 TERF2IPQ9NYB0 399 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms