RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 MAP4K3Q8IVH8 894 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 APLFQ8IW19 511 aaPredicted RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ARHGEF19Q8IW93 802 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SCUBE3Q8IX30 993 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CCDC105Q8IYK2 499 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 RPUSD2Q8IZ73 545 aaKnown RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ZDHHC14Q8IZN3 488 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SYCP3Q8IZU3 236 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CCDC89Q8N998 374 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ZNF564Q8TBZ8 553 aaPredicted RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ZNF398Q8TD17 642 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CHURC1Q8WUH1 139 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SLC20A1Q8WUM9 679 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CNKSR1Q969H4 720 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 RSRC1Q96IZ7 334 aaKnown RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 VCPIP1Q96JH7 1222 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 MAGEB18Q96M61 343 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TTC25Q96NG3 672 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TMEM237Q96Q45 408 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 MXRA8Q9BRK3 442 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 LXNQ9BS40 222 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TRIM31Q9BZY9 425 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 MAF1Q9H063 256 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CDC42EP4Q9H3Q1 356 aaKnown RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 UNC45AQ9H3U1 944 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 NOD2Q9HC29 1040 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ARHGEF10LQ9HCE6 1279 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TMEM8AQ9HCN3 771 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 CD248Q9HCU0 757 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 POLD4Q9HCU8 107 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SSU72Q9NP77 194 aaKnown RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 UBE2TQ9NPD8 197 aaPredicted RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 ARHGEF3Q9NR81 526 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 AAASQ9NRG9 546 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 RGL1Q9NZL6 768 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 NOP53Q9NZM5 478 aaKnown RBP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TMOD4Q9NZQ9 345 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 TMX2Q9Y320 296 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 NEU2Q9Y3R4 380 aa5.61□□□□□ -1.51
TMEM55B-204ENST00000553602 SSC5DA1L4H1 1573 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 TMEM120BA0PK00 339 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 DDTLA6NHG4 134 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 H0YCG3 227 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 PRPF4O43172 522 aaKnown RBP eCLIP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 LRRN2O75325 713 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 LUC7L3O95232 432 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 F12P00748 615 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 VIMP08670 466 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 PYGMP11217 842 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 ATF2P15336 505 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 CYP11B1P15538 503 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 POLD1P28340 1107 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 SFNP31947 248 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 MARCKSL1P49006 195 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 RARRES1P49788 294 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 JAK3P52333 1124 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 BPIFB4P59827 614 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 COPS2P61201 443 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 CLDN10P78369 228 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 IFI35P80217 286 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 COG2Q14746 738 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 TNIP1Q15025 636 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 MTFR1Q15390 333 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 PPP1R7Q15435 360 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 CCNG2Q16589 344 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 CLEC16AQ2KHT3 1053 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 USH1GQ495M9 461 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 SGO2Q562F6 1265 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 FKBP1CQ5VVH2 108 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 KRT39Q6A163 491 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 ACAD10Q6JQN1 1059 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 HIBCHQ6NVY1 386 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 XRRA1Q6P2D8 792 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 SMIM5Q71RC9 77 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 PTF1AQ7RTS3 328 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 TPH2Q8IWU9 490 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 C4orf19Q8IY42 314 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 FBXL13Q8NEE6 735 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 MDM1Q8TC05 714 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 HELQQ8TDG4 1101 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 EPS8L3Q8TE67 593 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 PIGOQ8TEQ8 1089 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 FBF1Q8TES7 1133 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 DDX1Q92499 740 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 N4BP2L2Q92802 583 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 INPP5DQ92835 1189 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 ARHGEF2Q92974 986 aaKnown RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 ZNF653Q96CK0 615 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 THAP11Q96EK4 314 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 MFSD14AQ96MC6 490 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 KREMEN1Q96MU8 473 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 NT5C1BQ96P26 610 aa5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 RAB3IPQ96QF0 476 aaPredicted RBP5.6□□□□□ -1.51
TMEM55B-204ENST00000553602 UCN2Q96RP3 112 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms