RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZMYND12Q9H0C1 365 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 WDR6Q9NNW5 1121 aaKnown RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 MARCH5Q9NX47 278 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 PIN4Q9Y237 131 aaKnown RBP8.18□□□□□ -1.1
ATXN3-219ENST00000553488 INPP5FQ9Y2H2 1132 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 NID2Q14112 1375 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
ATXN3-219ENST00000553488 COL4A2P08572 1712 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 CEP295Q9C0D2 2601 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 ZZEF1O43149 2961 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TMEM150BA6NC51 233 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 GOLGA8BA8MQT2 603 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TNFRSF10BO14763 440 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 ZBTB43O43298 467 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SOD2P04179 222 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SP9P0CG40 484 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 KLRC2P26717 231 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 RAB27AP51159 221 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 RCAN1P53805 252 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 EXOSC10Q01780 885 aaKnown RBP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 HTR4Q13639 388 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 PUM1Q14671 1186 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TWF2Q6IBS0 349 aaKnown RBP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 PHLDB3Q6NSJ2 640 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 AGMOQ6ZNB7 445 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 ZNF410Q86VK4 478 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 MAML2Q8IZL2 1156 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 REXO1Q8N1G1 1221 aaKnown RBP8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 DCLK2Q8N568 766 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SUMF1Q8NBK3 374 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 KCNG4Q8TDN1 519 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 GPR152Q8TDT2 470 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SLC5A5Q92911 643 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 IFT43Q96FT9 208 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TMEM175Q9BSA9 504 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 EMILIN2Q9BXX0 1053 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 GBP3Q9H0R5 595 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 UNC45AQ9H3U1 944 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 AGPAT5Q9NUQ2 364 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 STK39Q9UEW8 545 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 TCEAL9Q9UHQ7 104 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 CA14Q9ULX7 337 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 SAMM50Q9Y512 469 aa8.17□□□□□ -1.1
ATXN3-219ENST00000553488 ANHXE9PGG2 379 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 INPPL1O15357 1258 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 TEX28O15482 410 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 CHMP2AO43633 222 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RFPL2O75678 378 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 KRT37O76014 449 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 DCNP07585 359 aaKnown RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 SFNP31947 248 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 ARSDP51689 593 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 JAK3P52333 1124 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RNASELQ05823 741 aaKnown RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 CCINQ13939 588 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 TRIP11Q15643 1979 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 MTERF2Q49AM1 385 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 UBXN11Q5T124 520 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 C16orf46Q6P387 395 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 ZC3H14Q6PJT7 736 aaKnown RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 MRPL10Q7Z7H8 261 aaKnown RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 C1orf210Q8IVY1 113 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 ETFBKMTQ8IXQ9 262 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 ASPMQ8IZT6 3477 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 KCTD17Q8N5Z5 321 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 PJA1Q8NG27 643 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RUBCNQ92622 972 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 STAMQ92783 540 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 GJA10Q969M2 543 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RPS6KC1Q96S38 1066 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RIT2Q99578 217 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 SH2D3AQ9BRG2 576 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 SUV39H2Q9H5I1 410 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RSAD1Q9HA92 442 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 IFT122Q9HBG6 1241 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 SLC2A4RGQ9NR83 387 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 MRPL17Q9NRX2 175 aaKnown RBP8.16□□□□□ -1.1
ATXN3-219ENST00000553488 NRBP2Q9NSY0 501 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 CNTNAP2Q9UHC6 1331 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
ATXN3-219ENST00000553488 FAM208BQ5VWN6 2430 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 RALGAPA1Q6GYQ0 2036 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 KLF18A0A0U1RQI7 1052 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 CCDC195A0A1B0GUA6 201 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 F8W810 466 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 GNB5O14775 395 aa8.15□□□□□ -1.1
ATXN3-219ENST00000553488 NRP1O14786 923 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms