RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 UROC1Q96N76 676 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 KXD1Q9BQD3 176 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 FZD8Q9H461 694 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 LRWD1Q9UFC0 647 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 USP20Q9Y2K6 914 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 NUB1Q9Y5A7 615 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 CDY1Q9Y6F8 540 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 R4GN57 208 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 SPAG17Q6Q759 2223 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 DMDP11532 3685 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
ACTN1-208ENST00000553370 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 K7ERI5 159 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 PTGESO14684 152 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 EFEMP2O95967 443 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 LMNAP02545 664 aaKnown RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 ID4P47928 161 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 ARPP19P56211 112 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 OSTNP61366 133 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 HMGN5P82970 282 aaKnown RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 PFKPQ01813 784 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 EEF1DP3Q658K8 133 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 LILRA6Q6PI73 481 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 ANKS3Q6ZW76 656 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 ELMOD1Q8N336 334 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 LNX1Q8TBB1 728 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 CLSTN3Q9BQT9 956 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 FOXQ1Q9C009 403 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 FOXP1Q9H334 677 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 SLC38A7Q9NVC3 462 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 SPATA6Q9NWH7 488 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
ACTN1-208ENST00000553370 MRPS23Q9Y3D9 190 aaKnown RBP10.88□□□□□ -0.67
ACTN1-208ENST00000553370 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-208ENST00000553370 ANHXE9PGG2 379 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 I3L4J1 428 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 CD46P15529 392 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 MUTP22033 750 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
ACTN1-208ENST00000553370 HOXA9P31269 272 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 CLCNKBP51801 687 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 PEX3P56589 373 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 STRN3Q13033 797 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 SNW1Q13573 536 aaKnown RBP10.87□□□□□ -0.67
ACTN1-208ENST00000553370 MLF2Q15773 248 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-208ENST00000553370 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 PHLDB3Q6NSJ2 640 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 PARM1Q6UWI2 310 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 PJA1Q8NG27 643 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 FGF13Q92913 245 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 FGF14Q92915 247 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 DRC1Q96MC2 740 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 MRPL4Q9BYD3 311 aaKnown RBP10.87□□□□□ -0.67
ACTN1-208ENST00000553370 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 KMT5AQ9NQR1 393 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 ANKFY1Q9P2R3 1169 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 DNM3Q9UQ16 869 aa10.87□□□□□ -0.67
ACTN1-208ENST00000553370 TPRP12270 2363 aaKnown RBP10.86□□□□□ -0.67
ACTN1-208ENST00000553370 PODXLO00592 558 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 SPTLC1O15269 473 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 ADAM12O43184 909 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 LAMTOR5O43504 91 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 KINO60870 393 aaKnown RBP10.86□□□□□ -0.67
ACTN1-208ENST00000553370 MCM4P33991 863 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 GPC5P78333 572 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 MCTP1Q6DN14 999 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 C1orf210Q8IVY1 113 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 KIAA2013Q8IYS2 634 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 ITFG1Q8TB96 612 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 BICD1Q96G01 975 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 CDK5RAP3Q96JB5 506 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
ACTN1-208ENST00000553370 HCFC1R1Q9NWW0 138 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 MTRRQ9UBK8 725 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 KIF3AQ9Y496 699 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 ATG2BQ96BY7 2078 aa10.86□□□□□ -0.67
ACTN1-208ENST00000553370 GPR179Q6PRD1 2367 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 NUP210Q8TEM1 1887 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 KANSL1LA0AUZ9 987 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 H7C4K7 107 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 TMEM189-UBE2V1I3L0A0 370 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 HIP1RO75146 1068 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SP9P0CG40 484 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 CPB1P15086 417 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms