RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TRIP11Q15643 1979 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 BTBD18B2RXH4 712 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 EPB41L2O43491 1005 aaKnown RBP9.99□□□□□ -0.81
SYNE2-209ENST00000553308 TRAPPC3O43617 180 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ABLIM3O94929 683 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 SEC24AO95486 1093 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ADRB1P08588 477 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 CYP11B2P19099 503 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ELF1P32519 619 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 NAMPTP43490 491 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ARPP19P56211 112 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 NT5DC1Q5TFE4 455 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ATF7IP2Q5U623 682 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 LAIR1Q6GTX8 287 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 SLC8B1Q6J4K2 584 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 VITQ6UXI7 678 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 PRR23BQ6ZRT6 265 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ZNF461Q8TAF7 563 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 FAM3CQ92520 227 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 WASF1Q92558 559 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ZSWIM3Q96MP5 696 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 UROC1Q96N76 676 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 ASB16Q96NS5 453 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 TRMT61BQ9BVS5 477 aaKnown RBP9.99□□□□□ -0.81
SYNE2-209ENST00000553308 CYP4F11Q9HBI6 524 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 TUFT1Q9NNX1 390 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 RAB23Q9ULC3 237 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 INSL5Q9Y5Q6 135 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 PIAS3Q9Y6X2 628 aa9.99□□□□□ -0.81
SYNE2-209ENST00000553308 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 SMIM28A0A1B0GU29 152 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 ARHGEF35A5YM69 484 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 PODXLO00592 558 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 MAN2B1O00754 1011 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 LARGE1O95461 756 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 ATF2P15336 505 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 GJA1P17302 382 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 GDI1P31150 447 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 MCM7P33993 719 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 VIPR2P41587 438 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 CCR3P51677 355 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 NRLP54845 237 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 SATB1Q01826 763 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 DMWDQ09019 674 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 GAS6Q14393 721 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 PDZD4Q76G19 769 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 MAP4K3Q8IVH8 894 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 DIS3L2Q8IYB7 885 aaKnown RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 TCEAL8Q8IYN2 117 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 NECAB1Q8N987 351 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 NETO1Q8TDF5 533 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 IRF7Q92985 503 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 POLR3CQ9BUI4 534 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 LMAN1LQ9HAT1 526 aa9.98□□□□□ -0.81
SYNE2-209ENST00000553308 ZNF334Q9HCZ1 680 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-209ENST00000553308 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 ZNF197O14709 1029 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 SLC30A4O14863 429 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 MOSPD3O75425 235 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 CHRNB1P11230 501 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 PSMC3P17980 439 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 CCNE1P24864 410 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 GRM5P41594 1212 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 OSTNP61366 133 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 SRSF5Q13243 272 aaKnown RBP9.97□□□□□ -0.81
SYNE2-209ENST00000553308 PPP2R5DQ14738 602 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 PPP2R5AQ15172 486 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
SYNE2-209ENST00000553308 SMARCD2Q92925 531 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
SYNE2-209ENST00000553308 IER2Q9BTL4 223 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 CDT1Q9H211 546 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 SEMA4GQ9NTN9 838 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 RBM12Q9NTZ6 932 aaKnown RBP9.97□□□□□ -0.81
SYNE2-209ENST00000553308 CEP72Q9P209 647 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 TNFSF13BQ9Y275 285 aa9.97□□□□□ -0.81
SYNE2-209ENST00000553308 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.81
SYNE2-209ENST00000553308 CHURC1-FNTBB4DL54 471 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 H7C4K7 107 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ARNTLO00327 626 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 SYN3O14994 580 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 HRO43593 1189 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 GDF9O60383 454 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 JAK2O60674 1132 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 MICAL2O94851 1124 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 RETP07949 1114 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 MYL4P12829 197 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 RPA1P27694 616 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 HOXC13P31276 330 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 CXCL12P48061 93 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 FNTBP49356 437 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms