RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 FZD8Q9H461 694 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 IFT122Q9HBG6 1241 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 SLC5A4Q9NY91 659 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PCDHB2Q9Y5E7 798 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 RBM47A0AV96 593 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ABLIM1O14639 778 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 MAGEB2O15479 319 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 DYNC1LI2O43237 492 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ATP8B1O43520 1251 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 KRT19P08727 400 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 TBXAS1P24557 533 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 GNA15P30679 374 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 PLA2G4AP47712 749 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 MYL6P60660 151 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 GRIK4Q16099 956 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 DGKDQ16760 1214 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF394Q53GI3 561 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 NAA35Q5VZE5 725 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 CPA5Q8WXQ8 436 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 CDT1Q9H211 546 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 PRMT7Q9NVM4 692 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 STIM2Q9P246 746 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 STXBP5LQ9Y2K9 1186 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ALG6Q9Y672 507 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 TRIP12Q14669 1992 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 HEXIM1O94992 359 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 TNNC1P63316 161 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 TMEM62Q0P6H9 643 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 CASP8Q14790 479 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 DUOXA2Q1HG44 320 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 MTHFD1LQ6UB35 978 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ADAT2Q7Z6V5 191 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 EFCAB13Q8IY85 973 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 FAM49AQ9H0Q0 323 aaPredicted RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 RPF1Q9H9Y2 349 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 CNOT8Q9UFF9 292 aaKnown RBP9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
RAB3IP-218ENST00000553099 ESYT3A0FGR9 886 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ZSCAN5CA6NGD5 496 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 SLC15A5A6NIM6 579 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 KRIT1O00522 736 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CES2O00748 559 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 THAP12O43422 761 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 SPOPO43791 374 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ZEB2O60315 1214 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 TNNC2P02585 160 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 HOXC6P09630 235 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CYP2B6P20813 491 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 PROZP22891 400 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 NSFP46459 744 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 BPIFB4P59827 614 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 KCTD19Q17RG1 926 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CLEC16AQ2KHT3 1053 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ACAD10Q6JQN1 1059 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 RASAL3Q86YV0 1011 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ANKRD36BP1Q96IX9 119 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 PTPRHQ9HD43 1115 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 SETD4Q9NVD3 440 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 GTF3C4Q9UKN8 822 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 TNFSF13BQ9Y275 285 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 GPR25O00155 361 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ERLIN2O94905 339 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ASS1P00966 412 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 FGGP02679 453 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CFHP08603 1231 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 COMTP21964 271 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 FGFR4P22455 802 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CYP2C19P33261 490 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 AP3M2P53677 418 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 IRX5P78411 483 aaPredicted RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 GUCY2DQ02846 1103 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 GRM1Q13255 1194 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 SURF1Q15526 300 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF699Q32M78 642 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 ACTRT1Q8TDG2 376 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 CYFIP2Q96F07 1278 aa9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 DDX47Q9H0S4 455 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
RAB3IP-218ENST00000553099 COL1A2P08123 1366 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 DDX3YO15523 660 aaKnown RBP9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 GLI1P08151 1106 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 ARF4P18085 180 aaPredicted RBP9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 MARCKSL1P49006 195 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 MAP2K5Q13163 448 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 CCL14Q16627 93 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 KIZQ2M2Z5 673 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 DCAF12L1Q5VU92 463 aa9.71□□□□□ -0.85
RAB3IP-218ENST00000553099 IQSEC1Q6DN90 963 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms