RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZBTB39O15060 712 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 CHADO15335 359 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 SLC37A4O43826 429 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 SLITRK3O94933 977 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 EPN2O95208 641 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 LYPLA2O95372 231 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
CACNB3-220ENST00000551716 GLRA2P23416 452 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 RAP1GAPP47736 663 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 ROR1Q01973 937 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
CACNB3-220ENST00000551716 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 INF2Q27J81 1249 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 TPGS2Q68CL5 300 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 RALGPS2Q86X27 583 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-220ENST00000551716 SLFN12Q8IYM2 578 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 GAB3Q8WWW8 586 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 TCEAL4Q96EI5 215 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 DYDC2Q96IM9 177 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
CACNB3-220ENST00000551716 NOTCH4Q99466 2003 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 ZFYVE26Q68DK2 2539 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 SOBPA7XYQ1 873 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 C1QTNF9BB2RNN3 333 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 H7C4K7 107 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 ARNTLO00327 626 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 RPP40O75818 363 aaKnown RBP16.87■□□□□ 0.29
CACNB3-220ENST00000551716 AKAP3O75969 853 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 RECQL4O94761 1208 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 C1QTNF9P0C862 333 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 VIPR2P41587 438 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 SSRP1Q08945 709 aaKnown RBP16.87■□□□□ 0.29
CACNB3-220ENST00000551716 TMEM132AQ24JP5 1023 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 RNF43Q68DV7 783 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 ZBTB8OSQ8IWT0 167 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 ZSCAN18Q8TBC5 510 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-220ENST00000551716 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
CACNB3-220ENST00000551716 ZSWIM3Q96MP5 696 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 FZD8Q9H461 694 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 VPS45Q9NRW7 570 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 RALGAPA1Q6GYQ0 2036 aa16.87■□□□□ 0.29
CACNB3-220ENST00000551716 CCDC194A0A1B0GVG4 234 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 MYBPHLA2RUH7 354 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 LRRIQ4A6NIV6 560 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 HEPACAM2A8MVW5 462 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 DEXIO95424 95 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
CACNB3-220ENST00000551716 HOXB3P14651 431 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-220ENST00000551716 TKTP29401 623 aaKnown RBP16.86■□□□□ 0.29
CACNB3-220ENST00000551716 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 UPP1Q16831 310 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 PLA2G2CQ5R387 149 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 PSAPL1Q6NUJ1 521 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-220ENST00000551716 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 ASAH2Q9NR71 780 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 INSL5Q9Y5Q6 135 aa16.86■□□□□ 0.29
CACNB3-220ENST00000551716 SYN3O14994 580 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 CCR2P41597 374 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 CLCNKBP51801 687 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 EPHA5P54756 1037 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 FCHO2Q0JRZ9 810 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 PRPF4BQ13523 1007 aaKnown RBP16.85■□□□□ 0.29
CACNB3-220ENST00000551716 MAPK6Q16659 721 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 DAB2IPQ5VWQ8 1189 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 HAS1Q92839 578 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
CACNB3-220ENST00000551716 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 POLR3FQ9H1D9 316 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-220ENST00000551716 RXFP3Q9NSD7 469 aa16.85■□□□□ 0.29
CACNB3-220ENST00000551716 RBM12Q9NTZ6 932 aaKnown RBP16.85■□□□□ 0.29
CACNB3-220ENST00000551716 SPECC1L-ADORA2AF8WAN1 911 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
CACNB3-220ENST00000551716 ATG13O75143 517 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 MYL4P12829 197 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 PDIA3P30101 505 aaKnown RBP16.84■□□□□ 0.29
CACNB3-220ENST00000551716 NOVA1P51513 510 aaKnown RBP16.84■□□□□ 0.29
CACNB3-220ENST00000551716 CCDC6Q16204 474 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 Q6ZS52 159 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
CACNB3-220ENST00000551716 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
CACNB3-220ENST00000551716 AGXT2Q9BYV1 514 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 PDZD7Q9H5P4 517 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 SLITRK6Q9H5Y7 841 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 FRYQ5TBA9 3013 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 ASPMQ8IZT6 3477 aa16.84■□□□□ 0.29
CACNB3-220ENST00000551716 SLC38A8A6NNN8 435 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 ACKR2O00590 384 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 CTHP32929 405 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 MPLP40238 635 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 ARPP19P56211 112 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 EVCP57679 992 aa16.83■□□□□ 0.28
CACNB3-220ENST00000551716 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms