RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 VPS54Q9P1Q0 977 aa16.01■□□□□ 0.15
VPS29-209ENST00000551655 KLK13Q9UKR3 277 aa16.01■□□□□ 0.15
VPS29-209ENST00000551655 PCDHGA5Q9Y5G8 931 aa16.01■□□□□ 0.15
VPS29-209ENST00000551655 ATG2BQ96BY7 2078 aa16.01■□□□□ 0.15
VPS29-209ENST00000551655 LNP1A1A4G5 178 aa16■□□□□ 0.15
VPS29-209ENST00000551655 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
VPS29-209ENST00000551655 DCLK1O15075 740 aa16■□□□□ 0.15
VPS29-209ENST00000551655 PRKCBP05771 671 aa16■□□□□ 0.15
VPS29-209ENST00000551655 MYL4P12829 197 aa16■□□□□ 0.15
VPS29-209ENST00000551655 GNA11P29992 359 aa16■□□□□ 0.15
VPS29-209ENST00000551655 BRCC3P46736 316 aa16■□□□□ 0.15
VPS29-209ENST00000551655 USP11P51784 963 aa16■□□□□ 0.15
VPS29-209ENST00000551655 CREB5Q02930 508 aa16■□□□□ 0.15
VPS29-209ENST00000551655 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
VPS29-209ENST00000551655 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
VPS29-209ENST00000551655 CCINQ13939 588 aa16■□□□□ 0.15
VPS29-209ENST00000551655 TEAD2Q15562 447 aa16■□□□□ 0.15
VPS29-209ENST00000551655 PLK5Q496M5 336 aa16■□□□□ 0.15
VPS29-209ENST00000551655 DGKKQ5KSL6 1271 aa16■□□□□ 0.15
VPS29-209ENST00000551655 DEFB124Q8NES8 71 aa16■□□□□ 0.15
VPS29-209ENST00000551655 CCDC12Q8WUD4 166 aaPredicted RBP16■□□□□ 0.15
VPS29-209ENST00000551655 TCP11Q8WWU5 503 aa16■□□□□ 0.15
VPS29-209ENST00000551655 MTRQ99707 1265 aa16■□□□□ 0.15
VPS29-209ENST00000551655 GTSE1Q9NYZ3 720 aa16■□□□□ 0.15
VPS29-209ENST00000551655 HELZ2Q9BYK8 2649 aaKnown RBP15.99■□□□□ 0.15
VPS29-209ENST00000551655 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 ZNF197O14709 1029 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 ASAP2O43150 1006 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 THP07101 528 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 SPIRE1Q08AE8 756 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 XKR9Q5GH70 373 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 DAB2IPQ5VWQ8 1189 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 IFNLR1Q8IU57 520 aaPredicted RBP15.99■□□□□ 0.15
VPS29-209ENST00000551655 YAF2Q8IY57 180 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 C3orf58Q8NDZ4 430 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 LRRC3BQ96PB8 259 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 DUSP15Q9H1R2 295 aaPredicted RBP15.99■□□□□ 0.15
VPS29-209ENST00000551655 CYP4F11Q9HBI6 524 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 GOLGA2P5Q9HBQ8 144 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 CEP72Q9P209 647 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 USP20Q9Y2K6 914 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 INSL5Q9Y5Q6 135 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 BACE2Q9Y5Z0 518 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
VPS29-209ENST00000551655 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 TBX3O15119 743 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 SLC37A4O43826 429 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 RECQL4O94761 1208 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
VPS29-209ENST00000551655 ELF1P32519 619 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 CLCNKBP51801 687 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 EXOSC10Q01780 885 aaKnown RBP15.98■□□□□ 0.15
VPS29-209ENST00000551655 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 GLRA4Q5JXX5 417 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 STXBP5Q5T5C0 1151 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 RTL10Q7L3V2 364 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 ZNF461Q8TAF7 563 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 KIF12Q96FN5 646 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 ZC3H10Q96K80 434 aaKnown RBP15.98■□□□□ 0.15
VPS29-209ENST00000551655 BBC3Q96PG8 261 aaPredicted RBP15.98■□□□□ 0.15
VPS29-209ENST00000551655 LXNQ9BS40 222 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 SLITRK6Q9H5Y7 841 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 C8orf33Q9H7E9 229 aaPredicted RBP15.98■□□□□ 0.15
VPS29-209ENST00000551655 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
VPS29-209ENST00000551655 NUP205Q92621 2012 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CELSR3Q9NYQ7 3312 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 PATE3B3GLJ2 98 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CHADO15335 359 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 B3GAT3O94766 335 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 MICAL2O94851 1124 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 ABLIM3O94929 683 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CAVIN2O95810 425 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CEACAM1P13688 526 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
VPS29-209ENST00000551655 TNK2Q07912 1038 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CTTNQ14247 550 aaKnown RBP15.97■□□□□ 0.15
VPS29-209ENST00000551655 PCBP1Q15365 356 aaKnown RBP eCLIP15.97■□□□□ 0.15
VPS29-209ENST00000551655 UAP1L1Q3KQV9 507 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 CYP4A22Q5TCH4 519 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 PDZD3Q86UT5 571 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 SHKBP1Q8TBC3 707 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 FAM200AQ8TCP9 573 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 MSANTD3Q96H12 275 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 SLKQ9H2G2 1235 aaPredicted RBP15.97■□□□□ 0.15
VPS29-209ENST00000551655 TRPV4Q9HBA0 871 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 NEUROG3Q9Y4Z2 214 aa15.97■□□□□ 0.15
VPS29-209ENST00000551655 TRIP11Q15643 1979 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 MAST4O15021 2626 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 CYP3A7-CYP3A51PA0A087WV96 503 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 CDX4O14627 284 aaPredicted RBP15.96■□□□□ 0.15
VPS29-209ENST00000551655 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
VPS29-209ENST00000551655 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
VPS29-209ENST00000551655 GLRA2P23416 452 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 CYP3A7P24462 503 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 CYP4A11Q02928 519 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 TWF1Q12792 350 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 TFDP1Q14186 410 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms