RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 MLXIPLQ9NP71 852 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 SAMD15Q9P1V8 674 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CTNNAL1Q9UBT7 734 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 CCT8L1PA6NM43 557 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 VWA5AO00534 786 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 CFHP08603 1231 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ITIH2P19823 946 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 LIG4P49917 911 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 TAS1R3Q7RTX0 852 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 VSIG10LQ86VR7 867 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 SAMD3Q8N6K7 520 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
CACNB3-219ENST00000551544 IFT74Q96LB3 600 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 PCDHB2Q9Y5E7 798 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 GAS8O95995 478 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 EGFRP00533 1210 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 HLA-DRAP01903 254 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 RALAP11233 206 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ATF2P15336 505 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 GARTP22102 1010 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 WNT7BP56706 349 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 P3H4Q92791 437 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 SLCO2A1Q92959 643 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ROPN1BQ9BZX4 212 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-219ENST00000551544 PDGFDQ9GZP0 370 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-219ENST00000551544 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ROPN1Q9HAT0 212 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-219ENST00000551544 USTQ9Y2C2 406 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
CACNB3-219ENST00000551544 ASAP2O43150 1006 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 DGAT1O75907 488 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 PRKCEQ02156 737 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 LACTB2Q53H82 288 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 TNFAIP8L3Q5GJ75 292 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 CCDC60Q8IWA6 550 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 ANKRD42Q8N9B4 389 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 MCPH1Q8NEM0 835 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 KCNK9Q9NPC2 374 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 AVENQ9NQS1 362 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 ANAPC5Q9UJX4 755 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 ZNFX1Q9P2E3 1918 aaKnown RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 THAP12O43422 761 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 STBD1O95210 358 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 PSAPP07602 524 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 IVDP26440 423 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 NLRP11P59045 1033 aaKnown RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 PIGWQ7Z7B1 504 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 GIMAP7Q8NHV1 300 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 MAIP1Q8WWC4 291 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-219ENST00000551544 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 HOMER3Q9NSC5 361 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
CACNB3-219ENST00000551544 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNB3-219ENST00000551544 KCNA2P16389 499 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 DPEP1P16444 411 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 SLC1A1P43005 524 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 PTK6Q13882 451 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
CACNB3-219ENST00000551544 CYB5D1Q6P9G0 228 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 ATL2Q8NHH9 583 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 GRK7Q8WTQ7 553 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 FAM81BQ96LP2 452 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 TEPSINQ96N21 525 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-219ENST00000551544 TBK1Q9UHD2 729 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 PSME4Q14997 1843 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 EXTL3O43909 919 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 RGS20O76081 388 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 GJB6O95452 261 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 TTC4O95801 387 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 MYBL1P10243 752 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 CD58P19256 250 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 TAS2R40P59535 323 aa13.87□□□□□ -0.19
CACNB3-219ENST00000551544 SNCBQ16143 134 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms