RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 CXCL14O95715 111 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 MBD3O95983 291 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 NR2F2P24468 414 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TFAMQ00059 246 aaKnown RBP16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 ADAM9Q13443 819 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 CEP135Q66GS9 1140 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TMC7Q7Z402 723 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TRIML1Q8N9V2 468 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 PLEKHO2Q8TD55 490 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TMEM174Q8WUU8 243 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 UROC1Q96N76 676 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TSPAN18Q96SJ8 248 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 GZF1Q9H116 711 aaPredicted RBP16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 ADAM28Q9UKQ2 775 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 STXBP5LQ9Y2K9 1186 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 PTPRJQ12913 1337 aa16.43■□□□□ 0.22
SMARCD1-211ENST00000551497 CARNS1A5YM72 827 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 I3L4J1 428 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 FSCN2O14926 492 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 CYP3A5P20815 502 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 CCNE1P24864 410 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 LRPAP1P30533 357 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 BRCC3P46736 316 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 PSMD6Q15008 389 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 NFIL3Q16649 462 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 PLPP4Q5VZY2 271 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 ADGRD2Q7Z7M1 963 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 RNF168Q8IYW5 571 aaPredicted RBP16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 NELFBQ8WX92 580 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 TCF25Q9BQ70 676 aa16.42■□□□□ 0.22
SMARCD1-211ENST00000551497 HIDE1A8MVS5 230 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 PSMA7O14818 248 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 XPOTO43592 962 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 AKAP3O75969 853 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 DLATP10515 647 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 STX17P56962 302 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 STIM1Q13586 685 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 EDRF1Q3B7T1 1238 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 FAM171A1Q5VUB5 890 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 C9orf57Q5W0N0 161 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 MRPL43Q8N983 215 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 ZBP1Q9H171 429 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 ENTPD7Q9NQZ7 604 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 INTS13Q9NVM9 706 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 ATG2AQ2TAZ0 1938 aa16.41■□□□□ 0.22
SMARCD1-211ENST00000551497 COL6A3P12111 3177 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 ANO9A1A5B4 782 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 PIRO00625 290 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 C2CD2LO14523 706 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 PER2O15055 1255 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 SOD2P04179 222 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 CTSAP10619 480 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.226e-17■■■■■ 36.5
SMARCD1-211ENST00000551497 DLG4P78352 724 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 SURF1Q15526 300 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 KIAA0319Q5VV43 1072 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 RBM23Q86U06 439 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 NT5DC4Q86YG4 428 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 PARD3BQ8TEW8 1205 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 MED15Q96RN5 788 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 TSG101Q99816 390 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 FRMD4BQ9Y2L6 1034 aa16.4■□□□□ 0.22
SMARCD1-211ENST00000551497 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 CETN3O15182 167 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 SPTLC1O15269 473 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 LILRB3O75022 631 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 TNNI1P19237 187 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 CA8P35219 290 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 PPP1R2P41236 205 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 NLRP12P59046 1061 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 DUOXA2Q1HG44 320 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 DPCR1Q3MIW9 517 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 PDE12Q6L8Q7 609 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 CEP57Q86XR8 500 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 CSGALNACT2Q8N6G5 542 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms