RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TMC5Q6UXY8 1006 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 C15orf39Q6ZRI6 1047 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 RNF135Q8IUD6 432 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 C3orf58Q8NDZ4 430 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 DHX58Q96C10 678 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 CLSTN3Q9BQT9 956 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 PYM1Q9BRP8 204 aaKnown RBP20.68■□□□□ 0.9
DDX54-208ENST00000551344 RHOBTB2Q9BYZ6 727 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 MAGEF1Q9HAY2 307 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 CPSF3Q9UKF6 684 aaKnown RBP20.68■□□□□ 0.9
DDX54-208ENST00000551344 NR2E1Q9Y466 385 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
DDX54-208ENST00000551344 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 POLR2DO15514 142 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 XPOTO43592 962 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 DCXO43602 365 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 GCNT3O95395 438 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 RPL17P18621 184 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 STAMQ92783 540 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 KIF12Q96FN5 646 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 TRIM9Q9C026 710 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 POMKQ9H5K3 350 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 CDH22Q9UJ99 828 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 AGO2Q9UKV8 859 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 UBQLN1Q9UMX0 589 aaKnown RBP20.67■□□□□ 0.9
DDX54-208ENST00000551344 NUB1Q9Y5A7 615 aa20.67■□□□□ 0.9
DDX54-208ENST00000551344 SYN3O14994 580 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 PAPLNO95428 1278 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 LRPAP1P30533 357 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 BRCC3P46736 316 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 KRT85P78386 507 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 ZBTB41Q5SVQ8 909 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 ANKS3Q6ZW76 656 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 GLYCTKQ8IVS8 523 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 C7orf25Q9BPX7 421 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 BACE2Q9Y5Z0 518 aa20.66■□□□□ 0.9
DDX54-208ENST00000551344 CCDC195A0A1B0GUA6 201 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 GPR37L1O60883 481 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 WEE2P0C1S8 567 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 SPATA31D3P0C874 917 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 ADSSP30520 456 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 SPAG1Q07617 926 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 KCNA1Q09470 495 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 RAB33AQ14088 237 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 SPATA31D4Q6ZUB0 917 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 STXBP4Q6ZWJ1 553 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 KREMEN2Q8NCW0 462 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 POMGNT1Q8WZA1 660 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 ASB7Q9H672 318 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 ZDHHC7Q9NXF8 308 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 MTRRQ9UBK8 725 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 KCNH3Q9ULD8 1083 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 USTQ9Y2C2 406 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 DERAQ9Y315 318 aa20.65■□□□□ 0.9
DDX54-208ENST00000551344 TISP43B9A030 160 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 I3L4J1 428 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 MYBP10242 640 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 TKTP29401 623 aaKnown RBP20.64■□□□□ 0.89
DDX54-208ENST00000551344 ACOT2P49753 483 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 CASP5P51878 434 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 SYCP3Q8IZU3 236 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 LEO1Q8WVC0 666 aaPredicted RBP20.64■□□□□ 0.89
DDX54-208ENST00000551344 FAM212AQ96EL1 285 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 SUSD3Q96L08 255 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 SPATA32Q96LK8 384 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 TUBGCP4Q9UGJ1 667 aa20.64■□□□□ 0.89
DDX54-208ENST00000551344 LDHAP00338 332 aaKnown RBP20.63■□□□□ 0.89
DDX54-208ENST00000551344 GARTP22102 1010 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 CMA1P23946 247 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 OR1D2P34982 312 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 ASIC1P78348 528 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 TMEM31Q5JXX7 168 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 SPATA1Q5VX52 437 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 RTL10Q7L3V2 364 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 BEST2Q8NFU1 509 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 MUTYHQ9UIF7 546 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 FBXW11Q9UKB1 542 aa20.63■□□□□ 0.89
DDX54-208ENST00000551344 H7C4K7 107 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 ADAM12O43184 909 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 RFPL2O75678 378 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 ZMYND10O75800 440 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 PRPF6O94906 941 aaKnown RBP20.62■□□□□ 0.89
DDX54-208ENST00000551344 PAX3P23760 479 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 MCM4P33991 863 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 MRPL58Q14197 206 aaKnown RBP20.62■□□□□ 0.89
DDX54-208ENST00000551344 UVSSAQ2YD98 709 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 VARS2Q5ST30 1063 aaKnown RBP20.62■□□□□ 0.89
DDX54-208ENST00000551344 JADE1Q6IE81 842 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 CRELD2Q6UXH1 353 aaPredicted RBP20.62■□□□□ 0.89
DDX54-208ENST00000551344 PLCD3Q8N3E9 789 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 APPL2Q8NEU8 664 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 PRKD2Q9BZL6 878 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 SCAND2PQ9GZW5 306 aaPredicted RBP20.62■□□□□ 0.89
DDX54-208ENST00000551344 IKZF4Q9H2S9 585 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 TSHZ2Q9NRE2 1034 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 C2CD2Q9Y426 696 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms