RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CLTAP09496 248 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 GUCY2FP51841 1108 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 CREMQ03060 361 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 KCNA1Q09470 495 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 RAB33AQ14088 237 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 DYMQ7RTS9 669 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 SMG7Q92540 1137 aaKnown RBP14.22□□□□□ -0.13
NPAS3-209ENST00000551008 DDX12PQ92771 950 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 PRKD2Q9BZL6 878 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 ST6GALNAC4Q9H4F1 302 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
NPAS3-209ENST00000551008 ZDHHC7Q9NXF8 308 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 SORCS3Q9UPU3 1222 aa14.22□□□□□ -0.13
NPAS3-209ENST00000551008 LACTBL1A8MY62 500 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 H0YCG3 227 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 PPEF2O14830 753 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 OGTO15294 1046 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 OR1D2P34982 312 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 PLA2G5P39877 138 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 LIG4P49917 911 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 CASP5P51878 434 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 VCPP55072 806 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 NTHL1P78549 312 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 MRPL58Q14197 206 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 E2F4Q16254 413 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 CYP26C1Q6V0L0 522 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 RASSF8Q8NHQ8 419 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 BICD1Q96G01 975 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 SUSD3Q96L08 255 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 ZHX3Q9H4I2 956 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 SLC38A7Q9NVC3 462 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 KCNG1Q9UIX4 513 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 CPSF3Q9UKF6 684 aaKnown RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.13
NPAS3-209ENST00000551008 BACE2Q9Y5Z0 518 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 STYXL1Q9Y6J8 313 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 PIEZO1Q92508 2521 aa14.21□□□□□ -0.13
NPAS3-209ENST00000551008 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 FRMD3A2A2Y4 597 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 TBCAO75347 108 aaKnown RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 KRT18P05783 430 aaKnown RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 C8AP07357 584 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 ADSSP30520 456 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 LRPAP1P30533 357 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 RPL9P32969 192 aaKnown RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 WNT7BP56706 349 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 ROR1Q01973 937 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 SLC8B1Q6J4K2 584 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 POTEHQ6S545 545 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 CRELD2Q6UXH1 353 aaPredicted RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 ZNF720Q7Z2F6 126 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 ZSWIM2Q8NEG5 633 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 RSAD2Q8WXG1 361 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
NPAS3-209ENST00000551008 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 HCN4Q9Y3Q4 1203 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 CDY1Q9Y6F8 540 aa14.2□□□□□ -0.14
NPAS3-209ENST00000551008 WDR27A2RRH5 827 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 NRG2O14511 850 aaPredicted RBP14.19□□□□□ -0.14
NPAS3-209ENST00000551008 VNN2O95498 520 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 SCP2P22307 547 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 HOXA9P31269 272 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 AXDND1Q5T1B0 1012 aaPredicted RBP14.19□□□□□ -0.14
NPAS3-209ENST00000551008 IER5LQ5T953 404 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 SHC4Q6S5L8 630 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 ANKS3Q6ZW76 656 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 OTOP3Q7RTS5 596 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 GLIS3Q8NEA6 775 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 SLC7A14Q8TBB6 771 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 PBXIP1Q96AQ6 731 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 HCFC1R1Q9NWW0 138 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 CCDC39Q9UFE4 941 aa14.19□□□□□ -0.14
NPAS3-209ENST00000551008 SYN3O14994 580 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 SPTLC1O15269 473 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 SPTLC2O15270 562 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 CCL16O15467 120 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 NARSO43776 548 aaKnown RBP14.18□□□□□ -0.14
NPAS3-209ENST00000551008 PPP6R2O75170 966 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 ABLIM3O94929 683 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 F13A1P00488 732 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 NFICP08651 508 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 POU2F2P09086 479 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 HNRNPA1P09651 372 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPAS3-209ENST00000551008 ZSCAN22P10073 491 aaPredicted RBP14.18□□□□□ -0.14
NPAS3-209ENST00000551008 MATR3P43243 847 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPAS3-209ENST00000551008 ACOT2P49753 483 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 MTMR3Q13615 1198 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 STK38Q15208 465 aa14.18□□□□□ -0.14
NPAS3-209ENST00000551008 JADE1Q6IE81 842 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms