RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ARID3AQ99856 593 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 TRIM6Q9C030 488 aaPredicted RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 NXF3Q9H4D5 531 aaKnown RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 DISC1Q9NRI5 854 aa12.58□□□□□ -0.4
GPN3-208ENST00000550974 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
GPN3-208ENST00000550974 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 DPYSL4O14531 572 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 ERLIN2O94905 339 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 ELAVL2Q12926 359 aaKnown RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 TRDNQ13061 729 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 SYT13Q7L8C5 426 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 SYT12Q8IV01 421 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 HACE1Q8IYU2 909 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 ELMOD1Q8N336 334 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 RPLP0P6Q8NHW5 317 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 CPB2Q96IY4 423 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
GPN3-208ENST00000550974 URB1O60287 2271 aaKnown RBP12.57□□□□□ -0.4
GPN3-208ENST00000550974 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 KALRNO60229 2985 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 CHMP2AO43633 222 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 ARPP19P56211 112 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 ROR1Q01973 937 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 TUSC3Q13454 348 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 SLCO6A1Q86UG4 719 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 MINDY1Q8N5J2 469 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 TSTD1Q8NFU3 115 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 ZNF461Q8TAF7 563 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 NIFKQ9BYG3 293 aaKnown RBP12.56□□□□□ -0.4
GPN3-208ENST00000550974 ASAH2Q9NR71 780 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
GPN3-208ENST00000550974 APC2O95996 2303 aa12.56□□□□□ -0.4
GPN3-208ENST00000550974 ACACAQ13085 2346 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
GPN3-208ENST00000550974 SEC24AO95486 1093 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 FGFR3P22607 806 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 PTGER3P43115 390 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 GNAQP50148 359 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
GPN3-208ENST00000550974 SART3Q15020 963 aaKnown RBP12.55□□□□□ -0.4
GPN3-208ENST00000550974 PTPAQ15257 358 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 PCSK4Q6UW60 755 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 LPCAT2Q7L5N7 544 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 CSRNP2Q9H175 543 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 INSL5Q9Y5Q6 135 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
GPN3-208ENST00000550974 THADAQ6YHU6 1953 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 A0A1W2PRU2 124 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 TSPAN1O60635 241 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 PRKCBP05771 671 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 NAPAP54920 295 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 TWF1Q12792 350 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 PSMD2Q13200 908 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 STXBP5Q5T5C0 1151 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 ANO7Q6IWH7 933 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 ZNF654Q8IZM8 581 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 LEMD2Q8NC56 503 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 FBRSL1Q9HCM7 1045 aaKnown RBP12.54□□□□□ -0.4
GPN3-208ENST00000550974 CEP72Q9P209 647 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
GPN3-208ENST00000550974 ABCA7Q8IZY2 2146 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TEX51A0A1B0GUA7 166 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms